| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15600 |
|---|
| Symbol | |
|---|
| ID | 8386893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1603298 |
|---|
| End bp | 1604149 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644975638 |
|---|
| Product | orotidine 5'-phosphate decarboxylase, subfamily 2 |
|---|
| Protein accession | YP_003133422 |
|---|
| Protein GI | 257055590 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.321475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGCC GATCTTTCGG GGAGCGGTTG ACGGCGGCCG TGTCCGCTCG GGGTCCGCTG
TGTGTGGGCA TCGATCCGCA TCCGGCTCTG CTGGAGGCCT GGGGGCTTCC CGTCGACGTG
AGCGGGCTCG AACGGTTCGC TCTGACGGCC ACGGAGGCCC TCGCGGGGAC CGTGGCCGTG
CTCAAACCCC AGTCGGCGTT CTTCGAGGCC TACGGGGCCG CGGGGATCGC CGTGCTCGAA
CGGGTCCTCG CCATGGCGAG ACAGGCCGGT GCCCTGGTGC TGCTCGACGT CAAGCGGGGT
GACATCGGGT CCACGATGGC CGCCTACACG GCCGCCTATC TGGCCGACGA CGCCCCGCTG
GCGGCCGATG CGATCACCGT GTCGCCGTAT CTCGGGTTCG GTTCGCTGGA GCCTGCGCTG
AAGCAGGCTC GCAGCACGGG CCGAGGGGTG TTCGTGCTCG CGCGGACGTC CAACCCTGAG
GGAGGCACCG TGCAGTGTTC GCGAGGGGCC GACGGCGTCA CCGTCGCCCA GTCCGTCGTG
GATTCGGTTG CGGAGTGTAA CCGGGGGGCG GAGCCCCTCG GGGACGTCGG AGTCGTGGTC
GGGGCGACCG TGAAACCGGG TGAATTGCGG CTCGACGCGG TGAACGGGCC GGTACTCGCG
CCGGGACTCG GTGCGCAGGG CGCCACGGCC GAGGATCTGC GCCGGGTGTT CGGCGAGGGG
GTGCGGGCGG TGCTGCCGTC GTCGTCTCGT GACATCCTCC GGCACGGTCC CACGCCTGAG
GCATTGCGCT CGGCGGTCGA GGCGGCGCGG GAGAGTCTCG TGTCCATCCT GCCGCAAATG
TCATCGTCGT AA
|
|---|
| Protein sequence | MAGRSFGERL TAAVSARGPL CVGIDPHPAL LEAWGLPVDV SGLERFALTA TEALAGTVAV
LKPQSAFFEA YGAAGIAVLE RVLAMARQAG ALVLLDVKRG DIGSTMAAYT AAYLADDAPL
AADAITVSPY LGFGSLEPAL KQARSTGRGV FVLARTSNPE GGTVQCSRGA DGVTVAQSVV
DSVAECNRGA EPLGDVGVVV GATVKPGELR LDAVNGPVLA PGLGAQGATA EDLRRVFGEG
VRAVLPSSSR DILRHGPTPE ALRSAVEAAR ESLVSILPQM SSS
|
|---|
| |