| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15550 |
|---|
| Symbol | |
|---|
| ID | 8386888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1596111 |
|---|
| End bp | 1597043 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644975633 |
|---|
| Product | aspartate carbamoyltransferase |
|---|
| Protein accession | YP_003133417 |
|---|
| Protein GI | 257055585 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.824951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCATC TGCTGTCCAC CGACGGTCTC GACGCCGCTA CGGCCACGGC GATCCTCGAC
ACGGCCGATG AACTGAAACG CACTCTGTTG GGCCGCGAGG TCCGCAAACT ACCCACGCTG
CGTGGGCGCA CCGTGATCAC CTTGTTCTAC GAGAACTCGA CCCGCACCCG GGTGTCGTTC
GAGATCGCGG GCAAGTGGAT GAGCGCCGAC GTGGTGAACG TCTCCGCGGG CGGTTCGTCG
GTCGGCAAGG GTGAATCCCT CCGGGACACC GCGTTGACGT TGTCGGCCGC AGGCGCGGAC
TGCGTGGTCA TCCGGCATCC GGCCTCCGGT GCCGCTCATC GGCTCGCGGG CTGGCTGGCC
GAGACGGGGA CCAGCGTGAT CAACGCCGGG GACGGGACGC ACGAGCATCC GACGCAGGCG
TTACTCGACG CCGCCACGCT GCGGGAGCGA CTCGGCGGCC TTGAGGGCCG TCGCGTGACG
ATCGTCGGTG ACGTGCTCCA CAGCCGGGTC GCGCGGTCGA ACGCGCATCT GCTGCCCCTG
CTCGGCGCGG AGGTGACGTT GGTCGCACCA CCGACGTTGT TGCCGGTGGG AGTGGAGTCG
TGGCCGGTCA CCGTGTCCCA CGATCTCGAT GCCGCCCTGC CCGCCACCGA CGCGGTGATG
ATGCTGCGCG TGCAGGCCGA GCGCATGCAC GGAGGTTTCT TCCCTTCGGC GCGGGAATAC
GCGATCGCGT ACGGATTGAA CGAGACCCGG CTGAAATTGC TGCCCGAACA CGCCGTGGTA
CTGCACCCGG GACCGATGCT GCGCGGGATG GAGATCGCCT CGGCGGTGGC CGACGCACCC
AACGCGGTGA TCACCGAACA GGTCCGTAAC GGTGTGCACG TGCGGATGGC GGTGCTCTAT
CACCTGCTGG CGGGGGAAGG GGAGAAGTCG TGA
|
|---|
| Protein sequence | MRHLLSTDGL DAATATAILD TADELKRTLL GREVRKLPTL RGRTVITLFY ENSTRTRVSF
EIAGKWMSAD VVNVSAGGSS VGKGESLRDT ALTLSAAGAD CVVIRHPASG AAHRLAGWLA
ETGTSVINAG DGTHEHPTQA LLDAATLRER LGGLEGRRVT IVGDVLHSRV ARSNAHLLPL
LGAEVTLVAP PTLLPVGVES WPVTVSHDLD AALPATDAVM MLRVQAERMH GGFFPSAREY
AIAYGLNETR LKLLPEHAVV LHPGPMLRGM EIASAVADAP NAVITEQVRN GVHVRMAVLY
HLLAGEGEKS
|
|---|
| |