| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15270 |
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| Symbol | alaS |
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| ID | 8386860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1571174 |
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| End bp | 1573840 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975605 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003133389 |
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| Protein GI | 257055557 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0205422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.854238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAACTC ACGAAATCAA CAAGCGGTTC CTGGACTACT TCGAACGACA CGGCCACACC
AAGGTGCCCA GTGCGTCGCT GATCCTGGAC GATCCCACGT TGCTGTTCGT CAACGCGGGC
ATGGTCCAGT TCAAGCCGTA CTTCCTGGGC GAGGTGCCGC CGCCCTATCC CCGTGCCACG
AGCGTGCAGA AGTGCGTGCG GACCGGGGAC ATCGACGAGG TCGGCAAGAC CACCCGCCAC
AACACTTTCT TCCAGATGGC GGGCAACTTC TCGTTCGGTG ACTACTTCAA GCAGGGCGCC
ATCGAACTGG CCTGGGAGTT CATCACCACC TCGCAGGACG AGGGGGGTCT GGGCCTGAAC
CCGGACCGCT TGTGGGCCAC CGTGTACGAA CACGACGCCG AAGCGGCCGC ACTGTGGCGT
GATGTCGCGG GACTTCCCTC GGAACGCATC CAGTTCCGGG GCCCGGACGA CAACTACTGG
GACATGGGTG TGCCCGGCCC GTGTGGACCG TGTTCGGAGA TCTACTACGA CCGGGGTCCG
GAGTACGGTC GCGAGGGCGG TCCGGTGGTG GACGAGGACC GTTACCTCGA GATCTGGAAC
CTCGTGTTCA TGCAGGAGAT GCGTGGGGAG CTGAGCCCGA AGCAGGGCCA CGCACCCATC
GGCGAGCTCC CGCAGAAGAA CATCGACACC GGCATGGGTG TCGAGCGGGT CGCCTATTTG
CTGCAAGGGG TCGAGAACGT CTACGAGACC GACCTCGTAC GCCCGGTCAT CACCAAGGCC
GAGGAGTTCT CGGGCCGCCG CTACGGCGCC GATCACGCGG ACGACGTACG GTTCCGTGTG
ATCGCCGACC ACGCCCGCTC GGGTGTCATG CTGATCGCCG ACGGGGTCAC GCCCGGCAAC
GAGGCCCGCG GCTATGTCCT GCGCAGGCTG CTGCGGCGCA TCGTGCGGTC GGTGCGGCTG
CTGGGCGTGC ATGAGCCGGT GTTGCCGGAG TTCGCCGCGG TGGTGCGGGA CGCGATGGCC
CCCTCCTACC CGGAGATCGC GCGGGACTTC GACCGCATCA GCGATGTGAT GCGCGCCGAG
GAGGAGGCGT TCCTCGCCAC ACTGACCAGC GGTTCCCGCA TCTTCGACCT GGCCGCCCAG
GAGACCAAGC GTGCCGGTGG CACGATCCTC TCCGGGGACA AGGCGTTCCA GCTGCACGAC
ACCTACGGCT TCCCCATCGA TCTGACCTTG GAGATGGCGG CCGAGCAGGG GCTGTCGGTG
GACGAAGAGG GTTTCCGCAC CCTCATGGAG CAGCAGCGGC AGCGGGCGAA GGCCGACGCC
GCCTCCCGCA AGACCGGCCA CGGCGACTTG TCGGTCTATC GCAAGCTGCT CGAGGAGCAC
GGCGAGACCG AATTCCTCGG CTACACCGAC CTCCAGGCCA CCGCGCGTGT CCTCGGGCTG
CTCGTGGACG GGAAGCCCGT CCGCTCGGCG AGCGAGGGCA GCGTCGCCGA GCTGGTGCTC
GACCGCACCC CGTTCTACGC CGAGGGCGGT GGGCAGATCG CCGACACCGG TGTGTTGATC
GGTGAGGGTG CCGAGCTGAA GGTCCTCGAC GTGCAGCGGC TCGTGCCGGG ACTGTTCGTG
CACCGCGTCG AGGTCGTCGC GGGTGAGGTC GGGGTGGACA CCCAGCTCAC CGCGTCGGTG
GACGGTACGC GCCGTGCGTC CATCGCCCGT TCGCACTCGG CCACGCACCT CGTCCACGCG
GCGGTGCGCG GCGCCTACGG CAACCGTGCC GCCCAGGCGG GTTCCCTCAA CACCCCCGGT
CGCATGCGGT TCGACTTCAC CACGCCGAAG TCGGTGTCGG ACGACGTGCT CACCGAGGTG
GAGGAGGAGG TCAACGACTA CCTCCAGACC GACGTCGAGG TGCAGGCGTA CACCACCACC
AAGGACAGGG CCCTTGAACT CGGTGCGATC GCGTTGTTCG GCGAGAAGTA CGGGGACAGG
GTCCGTGTGG TCGACATGGG CGACTACTCA CGCGAGTTGT GCGGTGGGAC CCACGTGGAG
CGCATCGGCC AGCTCGGTCT GGTCAAGCTC GTCAGCGACT CCTCGGTCGG TTCCGGCGTG
CACCGGGTGG AGGCGCTCGT GGGCACCGAC GCCCTGCGAC ACGTGCGTAA GGAGCAACTT
TTGGTGTCGC AGTTGGCGAG CACACTCAAA GTGCCCGCCG ATGAGGTGCC GTCCCGGATC
CAGGATGTGT TGACCCGGCT GCGCAACGCG GAGAAGGAGA TCGAGCAGCT GCGGCTGCGC
GAGGTGTTGA ACTCCGCGTC GACGCTCGCC GAACGGGCTC GAGAGATCGC CGGTGTCTCC
GTCGTCGCCG AGCGACTCGA CCAGGAGGTC GACGCCGGGG CGTTGCGCAA GCTCACCGGC
GAGGTGCGTA ATCGACTGGG ATCGCGGCCG GGCGTGGTGG CGTTGTTCGC GCCCTCCGGT
GAGGGCAAGG TGAGTTTCGT CGTCGCCACC ACCGCCGAGG CGCGTGACGC CGGTCTGGCG
GCGGGCAAGC TCGTCCCCGC GTTCGCCGAA CTGGTCGGTG GTCGGGGTGG GGGTAAGCCC
GACATGGCGC AGGGCGGTGG CAGCAGACCC GAGGGTGTCG AGCAGGCTAT CGAGGCCCTC
CGCGCGGCGG TCGCGGCGAA CCGGTGA
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| Protein sequence | METHEINKRF LDYFERHGHT KVPSASLILD DPTLLFVNAG MVQFKPYFLG EVPPPYPRAT
SVQKCVRTGD IDEVGKTTRH NTFFQMAGNF SFGDYFKQGA IELAWEFITT SQDEGGLGLN
PDRLWATVYE HDAEAAALWR DVAGLPSERI QFRGPDDNYW DMGVPGPCGP CSEIYYDRGP
EYGREGGPVV DEDRYLEIWN LVFMQEMRGE LSPKQGHAPI GELPQKNIDT GMGVERVAYL
LQGVENVYET DLVRPVITKA EEFSGRRYGA DHADDVRFRV IADHARSGVM LIADGVTPGN
EARGYVLRRL LRRIVRSVRL LGVHEPVLPE FAAVVRDAMA PSYPEIARDF DRISDVMRAE
EEAFLATLTS GSRIFDLAAQ ETKRAGGTIL SGDKAFQLHD TYGFPIDLTL EMAAEQGLSV
DEEGFRTLME QQRQRAKADA ASRKTGHGDL SVYRKLLEEH GETEFLGYTD LQATARVLGL
LVDGKPVRSA SEGSVAELVL DRTPFYAEGG GQIADTGVLI GEGAELKVLD VQRLVPGLFV
HRVEVVAGEV GVDTQLTASV DGTRRASIAR SHSATHLVHA AVRGAYGNRA AQAGSLNTPG
RMRFDFTTPK SVSDDVLTEV EEEVNDYLQT DVEVQAYTTT KDRALELGAI ALFGEKYGDR
VRVVDMGDYS RELCGGTHVE RIGQLGLVKL VSDSSVGSGV HRVEALVGTD ALRHVRKEQL
LVSQLASTLK VPADEVPSRI QDVLTRLRNA EKEIEQLRLR EVLNSASTLA ERAREIAGVS
VVAERLDQEV DAGALRKLTG EVRNRLGSRP GVVALFAPSG EGKVSFVVAT TAEARDAGLA
AGKLVPAFAE LVGGRGGGKP DMAQGGGSRP EGVEQAIEAL RAAVAANR
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