| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15250 |
|---|
| Symbol | |
|---|
| ID | 8386858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1570337 |
|---|
| End bp | 1570741 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644975603 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003133387 |
|---|
| Protein GI | 257055555 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4768] Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0118972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.286282 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGCAG GGCAGATCGC CGCGCTGATC GCCGCGGGAG CCTTCGTGTT GCTGGTGATA
TTTCTGGCGA TCGCGTTGGT CAAGCTCGGC CGCACGCTGG ACGAGGCCAC GATCGCGATC
CGCAAGGCGC ACGAGAACAC CGACCCGATC CTGCACGGGG CCAACGAGAC GATCACCCAC
GTGAACACGC AGTTGGAGCG GGTGGACGGC ATCACCGCCA ACGCCCAGGC CGTCTCGGGC
AACGTCTCGG CGCTGTCCTC GGTGTTCACC GCCACGCTCG GAGGCCCACT GGTGAAGCTG
GCCGCGTTGT CGTACGGCAT CAGCAAGGCA CTGCGGGCAC GTCGCCGAAA GGCCGAGGAG
GGCAAGCACT CTCGCCGCAG GAGGAAGAAG GGCGGTAGGC GATGA
|
|---|
| Protein sequence | MSAGQIAALI AAGAFVLLVI FLAIALVKLG RTLDEATIAI RKAHENTDPI LHGANETITH
VNTQLERVDG ITANAQAVSG NVSALSSVFT ATLGGPLVKL AALSYGISKA LRARRRKAEE
GKHSRRRRKK GGRR
|
|---|
| |