| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15240 |
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| Symbol | |
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| ID | 8386857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1568896 |
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| End bp | 1570269 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644975602 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_003133386 |
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| Protein GI | 257055554 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.068247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.518579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACCAAG ATGAACTTTT CACGGTGAAT CCGGACGTCG CCGAACCCGC GTCCGCGCAC
TCGCCGCCGT CCGAGGACGA GGTCCCTCGT AACGCTCCCC TCGCGGTGCG GATGCGTCCT
CGTTCGTTGG ACGAGGTCGT CGGCCAACAG CACCTGTTGG GGCCGGGGGC GCCACTGCGC
CGGCTCGTGG AAGGCGCTAC CCCGGCTTCG GTGCTGTTGT ACGGGCCACC GGGCACGGGC
AAGACCACGC TGGCCAACCT CGTGTCCACG GCCACCGGGC GCCGATTCGT GGCTCTGTCG
GCCTTGTCGG CGGGCGTGAA GGAGGTCAGA GGAGTCATCG AGGAGGCGCG GCGGCGCCGC
CAGTACGACC TCGAGGACAC CGTGTTGTTC ATCGACGAGG TGCACCGGTT CTCCAAGACC
CAGCAGGACG CGTTGTTGGG GGCGGTGGAG GACCGCACCG TGCTGCTCGT CGCGGCGACC
ACGGAGAATC CGTCGTTCTC GGTGGTCGCG CCGTTGTTGT CGCGGTCGCT GGTGTTGCGG
CTGCACCCGC TGACCGACGA CGACATCGAT GCGCTCGTGC GTCGAGCGGT GGCCGACGAA
CGGGGTCTGG CAGGCACGGT GGAGGTGACC GACGACGCCG TGGCCCACCT GGTGCGGCTG
GCGGCGGGGG ACGCGCGTCG TGCGCTGACC GCCTTGGAGG CCGCGGCCGA GGCCGCCACG
GCCGTGGGCA CCCGCCGGGT GGATCTCGCC ATCGTGGAGT CCACCGTGGA CAAGGCAGCC
GTGCGCTACG ACCGGGACGG CGACCAGCAC TACGACGTCA CCAGCGCGTT CATCAAGTCG
ATCCGTGGTT CCGACGTCGA CGCCGCCCTG CACTATCTGG CCCGCATGAT CGAGGCGGGG
GAGGATCCCC GGTTCATCGC GCGCAGGCTG ATCGTGCACG CCAGCGAGGA CATCGGTATG
GCCGATCCGA GCGCGTTGCA GGCAGCCGTC GCCGCCGCGC ATGCCGTGCA ACTGGTCGGC
ATGCCCGAGG GTAGGCTCGC GCTCGCCCAG GCAACGGTGC ATTTGGCCAC GGCGCCCAAG
TCGAACGCTG TGATCACCGC CATCGACGCG GCGTTGGCCG ACGTGCGTGC GGGTGGGGTG
GGCAGTGTGC CCCCGCATCT GCGGGACGGT CATTACGCGG GCGCGGCCGC GCTCGGCAAC
GCGCAGGGTT ACCGCTACCC ACACGATGTG CCCGAGGGGA TACTGGCCCA GCAGTATCCG
CCCGACGAGT TGGTCGGCAA GAATTACTAC CGGCCCAGCA GGCACGGCGC GGAACGTACC
CTGTTCGAGC GCGTTCCCAA GCTCCGCCGC ACGATCCGGG GAGGCGGTCG GTAG
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| Protein sequence | MHQDELFTVN PDVAEPASAH SPPSEDEVPR NAPLAVRMRP RSLDEVVGQQ HLLGPGAPLR
RLVEGATPAS VLLYGPPGTG KTTLANLVST ATGRRFVALS ALSAGVKEVR GVIEEARRRR
QYDLEDTVLF IDEVHRFSKT QQDALLGAVE DRTVLLVAAT TENPSFSVVA PLLSRSLVLR
LHPLTDDDID ALVRRAVADE RGLAGTVEVT DDAVAHLVRL AAGDARRALT ALEAAAEAAT
AVGTRRVDLA IVESTVDKAA VRYDRDGDQH YDVTSAFIKS IRGSDVDAAL HYLARMIEAG
EDPRFIARRL IVHASEDIGM ADPSALQAAV AAAHAVQLVG MPEGRLALAQ ATVHLATAPK
SNAVITAIDA ALADVRAGGV GSVPPHLRDG HYAGAAALGN AQGYRYPHDV PEGILAQQYP
PDELVGKNYY RPSRHGAERT LFERVPKLRR TIRGGGR
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