| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15220 |
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| Symbol | aspS |
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| ID | 8386855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1565750 |
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| End bp | 1567522 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975600 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_003133384 |
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| Protein GI | 257055552 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.925983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.271227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTCGCA CCCACGACGC CGGCACGCTG CGTGTCGAAC ACGTTGGCCA GACAGTCACC
CTCACCGGTT GGGTGGCCCG GCGACGCGAT CACGGCGGGG TGATCTTCAT CGATCTCCGG
GACGCCAGCG GAGTCGCCCA GATCGTCTTC CGCGAGGGCG AGATGGCCGA ACGTGCGCAC
GCCCTGCGTT CGGAGTACTG CCTCAAGGTC ACCGGCGAGG TCGCCCGGCG ACCCGAGGGC
AACGAGAACC CGGAGATCCC CACCGGCGAC ATTGAGGTGT TCGTCACCGA GCTGGAGGTG
TTGTCGGAGT CGGCGGCGCT GCCGTTCCCG ATCGACGAAC GGCTGGAGGT CGGTGAGGAG
ACCCGGCTGC GCTACCGCTA CCTCGACCTG CGTCGCGAGG GACCGGCCCG CATCATGCGC
CTGCGCAGCG AGGTCAACCG GGTCGCGCGC GAGGTGCTGC ACCGGCACGG CTTCATCGAG
GTCGAGACGC CGACGATGAC CCGTTCCACG CCCGAGGGGG CCCGCGACTT CCTGGTCCCC
GCACGGCTCA AGCCGGGTTC CTGGTACGCC TTGCCGCAGT CGCCGCAGTT GTTCAAGCAG
CTGCTCATGG TCGGCGGTCT GGAACGCTAC TACCAGATCG CGCGGTGCTA TCGCGACGAG
GACTTCCGCG CCGATCGCCA GCCCGAGTTC ACCCAACTCG ACATCGAGAT GAGCTTCGTC
GAGCAGGACG ACGTCATGGC GCTCGCCGAG GACGTGTTGT CGGCGCTGTG GAAGCTCGCC
GGGGTGGAGG TGTCCACGCC GTTCCGGCGG ATGAGCTACG CCGAGGCGAT GAGCAAGTAC
GGCACCGACA AGCCGGACCT GCGTTTCGGG CTGGAGTTGG TCGAGCTCAC CGACTTCTTC
GCCGACACAC CGTTCCGGGT CTTCCAGGCA CCGTACGTCG GTGCCGTGGT CATGCCGGGT
GGAGCGGACC AGCCGCGGCG TACGCTCGAT GCGTGGCAGG AATGGGCCAG ACAGCGTGGT
CACAAGGGTC TGGCCTATGT CCTCGTGGGT GAGGACGGCA CGCTCGGTGG GCCGGTCGCC
AAGAACCTGT CCGAACACGA ACGTGCGAAC CTGGTCGAGG CCGCGGGCGC GAAGCCGGGT
GACTGCATCT TCTTCGCCGC GGGCAAGCCG AAGGACGCCC GACAGCTGCT GGGCATGGCC
CGGGTCGAGA TCGCCCACCG GCTCGGCATG ATCGACGAGA ATGCCTGGTC GTTCGTGTGG
GTGGTGGACT TCCCGATGTT CGAGGCGGCC GACGAGAGCG ACGACGTCAA CGTCGGCGGT
GGCAAGTGGA CCGCGTTGCA CCACGCCTTC ACCTCCCCGG CTCCGGAGTG GATCGACAAG
TTCGAGCAGG ATCCGGGTAA CGCGCTGGCC CAGGCCTACG ACATCGTCTG CAACGGCCAC
GAGATCGGCG GCGGATCGAT CCGTATCCAC CGGGCCGATG TGCAAAAGCG TGTGTTCGAG
GTCATGGGGT TGTCCGAGGA GGAGGCCCAG GACAAGTTCG GTTTCCTGCT CGACGCCTTC
CAGTACGGTC CTCCGCCGCA CGGTGGTGTC GCCTTCGGCT GGGACCGCAT CGTGATGTTG
CTCGCGGGTG CCGAGTCGTT GCGGGAGGTG ATCGCATTCC CGAAGACGGG AGGCGGTTAC
GACCCGCTCA CGGGCGCTCC GGCACCGATC ACCGCACAAC AGCGTAAGGA AGCGGGTGTC
GACGCCAAGC CGGCGGCGAC GCCACAACGC TAA
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| Protein sequence | MLRTHDAGTL RVEHVGQTVT LTGWVARRRD HGGVIFIDLR DASGVAQIVF REGEMAERAH
ALRSEYCLKV TGEVARRPEG NENPEIPTGD IEVFVTELEV LSESAALPFP IDERLEVGEE
TRLRYRYLDL RREGPARIMR LRSEVNRVAR EVLHRHGFIE VETPTMTRST PEGARDFLVP
ARLKPGSWYA LPQSPQLFKQ LLMVGGLERY YQIARCYRDE DFRADRQPEF TQLDIEMSFV
EQDDVMALAE DVLSALWKLA GVEVSTPFRR MSYAEAMSKY GTDKPDLRFG LELVELTDFF
ADTPFRVFQA PYVGAVVMPG GADQPRRTLD AWQEWARQRG HKGLAYVLVG EDGTLGGPVA
KNLSEHERAN LVEAAGAKPG DCIFFAAGKP KDARQLLGMA RVEIAHRLGM IDENAWSFVW
VVDFPMFEAA DESDDVNVGG GKWTALHHAF TSPAPEWIDK FEQDPGNALA QAYDIVCNGH
EIGGGSIRIH RADVQKRVFE VMGLSEEEAQ DKFGFLLDAF QYGPPPHGGV AFGWDRIVML
LAGAESLREV IAFPKTGGGY DPLTGAPAPI TAQQRKEAGV DAKPAATPQR
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