| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15130 |
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| Symbol | |
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| ID | 8386846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1554590 |
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| End bp | 1557028 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975591 |
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| Product | (p)ppGpp synthetase, RelA/SpoT family |
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| Protein accession | YP_003133375 |
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| Protein GI | 257055543 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0120895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.467007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCATGGA CCGAAGGCGT GGGCACAGAC AGGACTGTTC GCGCGTTACT CTTGACTCAT
CGGCCGCGTG ATGAGCTGGA GGTACGGGTG AGCCAAGAGC TTGATTCCGT GGTCACTGCC
CAGTCGGGCA CGGGCGCTCC CACCCGCGAT GACCGAAGCG GAACGAATGG CACCGGTACC
ACTGTCCGCG CGCCGTCCGC GACCAGGAGG GTGAGAGCGC GGCTGGCCCG GCGCATCACC
GCGCAGCGGC CCGCATCGGT GAAGCAGGTG CTCGAACCGC TGGCCGCGAT CCACCGGGAA
CTGCATCCGA ACGCGGACCT GGCGTTGTTG CAGCGGGCGT ACGACACCGC TGAGGAACTC
CACCGGGGCC AGCACCGTAA GTCCGGTGAC CCGTACATCA CGCATCCGCT CGCGGTGGCG
ACCATCCTGG CCGAGCTGGG CATGGACACC ACGACCCTCG TCGCCGCGCT GCTGCACGAC
ACCGTCGAGG ACACCGGCTA CTCGGTGGAA CAGCTCACCG AGGACTTCGG GGAGAAGGTC
GCCCAGCTGG TCGACGGGGT CACCAAACTG GACAAGGTCA AGCTCGGCAC GGCGGCGGAA
GCGGAGACCA TCCGCAAGAT GGTCATCGCG ATGGCGCGGG ACCCCCGCGT GTTGGTGATC
AAACTCGCCG ACCGGCTCCA CAACATGCGC ACCATGCGGT TCCTGCCGCC GGAGAAGCAG
GCCCGCAAGG CCAAGGAGAC GCTCGAGGTC CTCGCCCCGT TGGCACACCG GCTGGGGATG
TCGACGGTGA AGTGGGAGCT GGAGGATTTG GCGTTCGCCA TCCTGCAGCC GAAGAAATAC
GACGAGATCG TACGGCTAGT CGCCGACCGG GCGCCGTCTC GCGACACCTA TCTGCGCTGG
GTGATCGGGG AGCTGACCCG GCAGCTGGAG GAATCGCGCA TCAACGCGAA GGTCGAGGGT
CGGCCCAAGC ACTACTACTC GATCCACCAG AAGATGATCG TGCGCGGGCG CGACCTGGAT
GACATCCACG ACCTGGTGGG CGTGCGCATC CTCGTGGAGG ACGTCCGCGA CTGTTACGCG
GCCATGGGTG TCGTGCACGC GTTGTGGCAA CCGATGCCGG GCCGGTTCAA GGACTACATC
GCGCAGCCAC GCTACGGCGT GTACCAGTCA CTGCACACGA CCGTGATCGG TCCGGACGGT
AAGCCGCTCG AGGTGCAGAT CCGCACGCAC GAGATGCACC GCACCGCCGA GTACGGCATC
GCGGCCCACT GGCGGTACAA GGAGACCAAG GGCACGCACA AGGGCAACGC CGTCGAGATC
GACGAGATGG CGTGGATGCG CCAGCTGTTG GACTGGCAGC GGGAGGCCGC CGACCCGGGC
GAGTTCCTGG AGTCGCTGCG TTACGACCTC GCCACCAGGG AGATCTTCGT CTTCACCCCC
AAGGGTGACG TGATCACGTT GCCGGTGGGG TCCACGCCGG TGGACTTCGC CTATGCCGTG
CACACCGAAG TGGGGCATCG CTGCATCGGT GCCAGGGTCA ACGGCAGGCT CGTCGCGCTC
GAACGCAAGC TCGACAACGG TGAGGTCGTC GAGATCTTCA CGTCGAAAGC CGAGGGTGCG
GGGCCCAGCC GCGACTGGAT GTCGTTCGTG TGCTCGCCCA AGGCGAAGGC GAAGATCCGG
CAGTGGTTCG CCAAGGAGCG CCGGGACGAG GCCATCGAAG CGGGCAAGGA GGCCATCGCC
AAGGAGGTCC GCAAGGTCGG GTTGCCCCTG CAACGACTGG TGTCGGCCGA CACGATGAGT
GCGGTCGCCA AGGAGCTGCG GCACCCCGAC ATCAGTTCGC TGTACGCGGC GGTGGGTGAG
CACCAGGTGG GCGCCCAGCA CGTCGTGCAA CGTCTGGTGG CGCTTCTTGG AGGTGTCGAC
GAGGCGGAGG AGGAACTCGC GGAGCGGGCC ACTCCGTCCA CGGTCGCGCG GCGCCGCGGT
GCGGGTGATG TCGGAGTGGT GGTGAAGGGC CAGACCGACA TCTGGACCAA ACTCGCGCGC
TGCTGCACTC CCGTGCCCGG GGACGAAATC CTCGGCTTCG TCACCCGCGG CGGTGGGGTG
AGCGTGCACC GCACGGACTG CACGAACGCC AACGAACTGC GCAAGCAGCC GGAACGGTTG
TTGGAGGTCG AGTGGGCGCC GACCGAGTCG TCGGTGTTCC TCGTGGCCAT CCAGGTGGAG
GCGTTGGACC GGCATCGACT GCTGTCCGAC ATCACCAAGG TGCTCGCCGA TGAGCGGGTC
AACATCCTGT CGGCGTCGGT GACGACCTCG CGGGACCGGG TGGCGGTGAG TCGGTTCACG
TTCGAGATGG GTGATCCCAA GCATCTCGGA CACGTGCTCA AGATCGTCCG CAACGTCGAG
GGCGTGTACG ACGTCTACCG CGTGACCTCG GCGTCCTGA
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| Protein sequence | MPWTEGVGTD RTVRALLLTH RPRDELEVRV SQELDSVVTA QSGTGAPTRD DRSGTNGTGT
TVRAPSATRR VRARLARRIT AQRPASVKQV LEPLAAIHRE LHPNADLALL QRAYDTAEEL
HRGQHRKSGD PYITHPLAVA TILAELGMDT TTLVAALLHD TVEDTGYSVE QLTEDFGEKV
AQLVDGVTKL DKVKLGTAAE AETIRKMVIA MARDPRVLVI KLADRLHNMR TMRFLPPEKQ
ARKAKETLEV LAPLAHRLGM STVKWELEDL AFAILQPKKY DEIVRLVADR APSRDTYLRW
VIGELTRQLE ESRINAKVEG RPKHYYSIHQ KMIVRGRDLD DIHDLVGVRI LVEDVRDCYA
AMGVVHALWQ PMPGRFKDYI AQPRYGVYQS LHTTVIGPDG KPLEVQIRTH EMHRTAEYGI
AAHWRYKETK GTHKGNAVEI DEMAWMRQLL DWQREAADPG EFLESLRYDL ATREIFVFTP
KGDVITLPVG STPVDFAYAV HTEVGHRCIG ARVNGRLVAL ERKLDNGEVV EIFTSKAEGA
GPSRDWMSFV CSPKAKAKIR QWFAKERRDE AIEAGKEAIA KEVRKVGLPL QRLVSADTMS
AVAKELRHPD ISSLYAAVGE HQVGAQHVVQ RLVALLGGVD EAEEELAERA TPSTVARRRG
AGDVGVVVKG QTDIWTKLAR CCTPVPGDEI LGFVTRGGGV SVHRTDCTNA NELRKQPERL
LEVEWAPTES SVFLVAIQVE ALDRHRLLSD ITKVLADERV NILSASVTTS RDRVAVSRFT
FEMGDPKHLG HVLKIVRNVE GVYDVYRVTS AS
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