| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15110 |
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| Symbol | |
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| ID | 8386844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1552804 |
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| End bp | 1554048 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975589 |
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| Product | protein translocase subunit secF |
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| Protein accession | YP_003133373 |
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| Protein GI | 257055541 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.66233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGAGAGT CCACGGTGAA CACCACGAAC GCCGCGGGAC AGGAACCCGC GAAGCAGTCG
GTCTTCCAGC GGCTCTACAC GGGTACCGGC GCGTTCGACA TCGTCGGCCA TCGCCGTAAG
TGGTTCCTCG CCTTCGGCGC TTTGGTCCTG GTGTGTTTCG TCTCGATGGG GCTGAAGGGC
TTCAACTTCG GCATCGCCTT CGAGGGCGGC ACCCAGATCC AGCTGCCCGC ACAGGGCGCG
AACGGCACGA TCACCACCGA GGAGGCACAG GAGGTCTTCT CGGACACGCT GGGAAGGAAC
CCCGCCGAGA CCCAACAGGT CGGCACCGGT GAGGCGGCCA CCATCCAGTT GCGTTCGGAG
ACACTCACGC CGGCCGAGGT GGCCCAGGTC AAACAGGCGC TGTTCACCGA GCTGCAACCG
CTCGGCACCG ACGGCCAACC CAGTGAGCGG GCCATCAGCG ACAGTCGGGT CAGCGCCTCG
TGGGGTGGTG AGATCTCCCG GCAGGCACTG ATCGCACTGG CGGTGTTCCT GGTCCTGGTG
GCGGTGTTCC TCATCCTCTA CTTCGAGAAG TGGATGGCGC TCGCCGCGCT CGTCGCGCTG
CTGCACGACG TGGTCGTCAC GGCGGGTGTG TACTCGCTGG TGGGCTTCCA GGTCACCCCG
GCCACCGCCA TCGGCCTGCT GACGATCCTC GGCTACTCGC TCTACGACAC CGTGGTCGTG
TTCGACAAGG TCAAGGAGAA CACCCGCGGC ATCCTCAACC TGACGCGACG CACCTACGCC
GAGGCCGCCA ACCTGGCCGT GAACCAGACG TTGATGCGTT CCATCAACAC GTCGGTGATC
GCGCTGCTGC CCGTGCTGGG GATGCTGGTC ATCGGCTACC TCCTGCTCGG TTCCGGAACC
TTGCAGGACC TGGCCCTGGT GCTGATCACC GGTATGGTCG CCGGGACCTT CTCCTCGGTG
TGCCTGGCCA CGCCGCTGCT GGTCTCGTTC AAGATGCGCG ATCCGAAGTA CCAGAAGCAG
GCCGAGAAGG TCTACGCGCG CCGGGAACAG CTGGCTCGGA AACGGAGTGA GAACGGAGCC
GCGGTCAGCG ACGACGACCA CTTCGATCCG GGCGACGATG AACAGCTCGC CGCCGAGCTG
CGCCGGGAGA AGGCGCGCGC GGCGGCGGCC AGCGTGCCCG CACGGCACCC GAAGTCGACA
GCACAACGAC GGCCCGGCCG TCCGACTGGG AAGAAGAAAC GGTGA
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| Protein sequence | MGESTVNTTN AAGQEPAKQS VFQRLYTGTG AFDIVGHRRK WFLAFGALVL VCFVSMGLKG
FNFGIAFEGG TQIQLPAQGA NGTITTEEAQ EVFSDTLGRN PAETQQVGTG EAATIQLRSE
TLTPAEVAQV KQALFTELQP LGTDGQPSER AISDSRVSAS WGGEISRQAL IALAVFLVLV
AVFLILYFEK WMALAALVAL LHDVVVTAGV YSLVGFQVTP ATAIGLLTIL GYSLYDTVVV
FDKVKENTRG ILNLTRRTYA EAANLAVNQT LMRSINTSVI ALLPVLGMLV IGYLLLGSGT
LQDLALVLIT GMVAGTFSSV CLATPLLVSF KMRDPKYQKQ AEKVYARREQ LARKRSENGA
AVSDDDHFDP GDDEQLAAEL RREKARAAAA SVPARHPKST AQRRPGRPTG KKKR
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