Gene Svir_14970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_14970 
Symbol 
ID8386830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1541501 
End bp1542646 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content71% 
IMG OID644975576 
ProductPhosphatidylinositol alpha-mannosyltransferase 
Protein accessionYP_003133360 
Protein GI257055528 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTCG GCATCGTGTG TCCGTACTCG TTCGACGTCC CCGGCGGAGT GCAAGGGCAC 
GTGGTGGATC TCGCCAAGGC GTTGCGGGCG CTCGGGCACA CCGTGTCGGT GCTCGCGCCC
GGGGACGAGG ATTCCACCCA CCTACCCGGA TTCGTGCAGC CGGCGGGGCG GTCGCTCGGC
ATCCCGTACA ACGGGTCGGT GGCCCGACTG CAGTTCGGGC CGGTCTCCTA CGCGCGGGTG
CGGCGATGGC TGCGCGAGCA CGACTTCGAC GTGTTGCACC TGCACGAGCC CACGGCCCCG
AGCCTGTCGT TGCTCGCGTT GACGGTCGCG GAAGGCCCCA TCGTCGCGAC CTTCCACACT
TCGACGCCGC GTTCTCGCAC GTTGGCGGCG TTCGAACCGG TGCTGCGCCC GCTGTTGGAG
AAGGTCACCG CACGGATCGC CGTGTCGGCG CTGGCCCGCC GGGTCCAGGT GGAGCACCTC
GGCGGCGACG CCGTCGAGAT CCCCAACGGT GTGGACACGG CGTTCTTCGC CGATGCCGAA
CCCTTGGACG GTTATCCCCG GCAGGGCGGC ACGATCGGGT TCGTCGGCCG TTACACCGAG
CCCCGTAAGG GCATGGGCGT ACTCTTGGAC GCGCTGCGAC TGCTGGCACC CGAATTGCCG
TCGCTGCGGC TGCTCGTCGT CGGCAGGGGA GAGGTCGAGA CGCTGCACCG GCAAGCCGGG
CCAGAACTGG TGCCCCGGCT CGACGTGCTC GGTCAGGTGG ACGACGAGAC CAAGGCGCGG
GTGCTGCGCA GTGTCGACGT CTACTGCGCG CCCAATCTGG GGGGAGAGAG TTTCGGGATG
ATCCTCACCG AGGCGATGGC GGCGGGGACA CCCGTCGTGG CCAGTGCCCT CGACTCGTTC
CGGCGGGTGC TCGACGACGG TCGGGCCGGG GTGCTCGTAC CCACCGGCGA CGCCGAGGCG
CTCGCGGCGG CGTTGCGGGA GCTGCTCGCC GATCCGGTGC GGCGGGCGCG GCTGTCGGAG
GCCGCCAGCC GGCGGGTCAC CAGATACGAC TGGGGCACCG TGGTGCGGCA GGTGCTTCGG
GTGTACGAGA CGGCGATCGC GGCCGATCCC CGTAAGGTCG CCGCTGACGT CGCCATGGCG
CGATGA
 
Protein sequence
MRVGIVCPYS FDVPGGVQGH VVDLAKALRA LGHTVSVLAP GDEDSTHLPG FVQPAGRSLG 
IPYNGSVARL QFGPVSYARV RRWLREHDFD VLHLHEPTAP SLSLLALTVA EGPIVATFHT
STPRSRTLAA FEPVLRPLLE KVTARIAVSA LARRVQVEHL GGDAVEIPNG VDTAFFADAE
PLDGYPRQGG TIGFVGRYTE PRKGMGVLLD ALRLLAPELP SLRLLVVGRG EVETLHRQAG
PELVPRLDVL GQVDDETKAR VLRSVDVYCA PNLGGESFGM ILTEAMAAGT PVVASALDSF
RRVLDDGRAG VLVPTGDAEA LAAALRELLA DPVRRARLSE AASRRVTRYD WGTVVRQVLR
VYETAIAADP RKVAADVAMA R