Gene Svir_14950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_14950 
Symbol 
ID8386828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1539970 
End bp1540584 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content68% 
IMG OID644975574 
ProductCDP-diacylglycerol inositol 3-phosphatidyltransferase 
Protein accessionYP_003133358 
Protein GI257055526 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACA TCTTCGCCCG CGCTTCCGTG TCTCGCGTCA CCGACCCGCT CGGTGCCGCG 
TTGGTACGCG CCGGTCTGAC TCCGAACGCG ATGACCGTCA TCGGCACCGT GGGTGCCATC
GGTGGAGCGC TTGTGTTCTT CCCCACCGAC ATGCTGCTCG TCGGCACGTT CGTGGTGTGG
GGCTTCGTGA TGCTGGACCT CCTCGACGGT GCGATGGCGC GGGTCCAGGG GAGTACCCCG
TTCGGGGCCG TGCTCGACGC CACGTGTGAC CGTCTCGTCG ACGGCGCGTT GTTCGCCGCC
ATCGCCTGGT GGGGGTTCGT CGTCGTCGAC AATCCACGCA TCGGCGTGGC CGCACTGTTG
TGTCTCGTTC TCGCGCAGGT CATCTCCTAC GTCAAGGCCC GGGCGGAGGC GTCCGGATTC
GGGGACGTCG CCAACGGCGG GCTCATCGAA CGCGCGGAAC GGTTGATCAT CACGCTCGTC
GGCACCGGCT TGACGGGACT GGGACTGCCG TACGCGGTCG AGGTGTCCCA ATGGCTGCTG
GCCGGGCTCT CGGTGGTCAC CTTGGCGCAA CGGATCACGG CGGTGGCGAA GGCGGCGGGA
AAGGCGCGGC TGTGA
 
Protein sequence
MLNIFARASV SRVTDPLGAA LVRAGLTPNA MTVIGTVGAI GGALVFFPTD MLLVGTFVVW 
GFVMLDLLDG AMARVQGSTP FGAVLDATCD RLVDGALFAA IAWWGFVVVD NPRIGVAALL
CLVLAQVISY VKARAEASGF GDVANGGLIE RAERLIITLV GTGLTGLGLP YAVEVSQWLL
AGLSVVTLAQ RITAVAKAAG KARL