Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_14840 |
Symbol | |
ID | 8386817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1531383 |
End bp | 1532714 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975563 |
Product | transcriptional regulator/sugar kinase |
Protein accession | YP_003133351 |
Protein GI | 257055519 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGG TGCAGGTTTC TCAATCCGGA CGGACGAACA CGACGATGTT GGTGGGCGAG CACATCGACA GCCTGGCTAC CGTGCTCGAC CTTGTACGTT CCGGCGCCGC GAGGACCCGG CCGGAGATCG GCAGGCGGTC AGGGCTCGGA CGCACAGTCG TCACCCAACG TGTCAACCAG CTCATGGCAT GTGGGCTGTT GGAGGAAGGT GCGCTCGGCC CATCCAGCGG GGGCCGTGCT CCGCGCGAGT TGAAATTCCG CGCGCATGCG GGTGTGATCC TCGCCGCCGA ACTCGGCGCC ACCAGCATCA ACGTCGGCGT CGTCGACCTG GCCGGCACCG TTTTGGCCGA GCACTCCGAG GACGCGGACA TCGCGGCGGG GCCCGAGGCC GTGTTGGAAC GGGTCGAGGA AGTGCTCGAC GAGTTGCTCG ACCAGGTACG CGCCGAACAG AACGACCCGG ATCTGACCGT GTGGGGGGTG GGCATCGGAC TTCCCGGCCC GGTGGAGTTC GCCACCGGAC GCCCCAGCGC GCCCCCCATC ATGCCCGGCT GGGACGGCTA CCCGGTACGC GACCGACTCG CCCGGCGCTA CAACACGCCG GTGTGGGTGG ACAACGAGGT CAACACCATG GCCCTCGGTG AGCTGCGTGC GGGGTCGGCC CGAGGCCAAC GGGACATCCT CTACGTCAAG ATCGGCACAG GCATCGGTGC CGGACTCGTC TCAGGCGGGA CGCTGCACCG GGGAAGTCAG GGCTGCGCAG GGGACATCGG TCACGCCGCG GTCTCCGACG AGACGGAAGT GGTGTGCCGA TGCGGCAACA TCGGCTGCCT GGAGGCGTAT GCCGGGGGCG CCGCACTGGC CCGGGACGGC CTGAGCGCGG CCCAGGAGGG CCGTAGTCGT CTCCTCGCCG AAGTCCTCGC CGACACAGGG ACGATCACCG CTGCGGACAT CTCCCGGGCC GCTCAAAGCG GCGATCGCAC CTCGGTGGAG CTGTTGACCC GGGCGGGACG GTTCATCGGT GGTCTGCTCG CGACGTTGGT CAGCTTCTTC AATCCGGCGC TGGTCATCAT CGGCGGCGGG GTCGCGGGGG CCGGCGACCT GCTCCTGGCG GCCGTGCGCG AAACCGTCTA CCGCCGGTCA CTGCCGTTGG CCACCAGAGA GCTACGCATC ATCCGTTCCA CCCTCAACGA CCGGGCCGGG CTCGTGGGGG CCGCGTTCAT GGTCATCGAC GAGCTGTTCA CGCCCGAGCG TCTGGCACGG TGGGTGACCG AAGGCTCACC CGCCGGATCA CCGGAGCTCG TGCACGTCCC GCTACGGACC CCACTGCCCT GA
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Protein sequence | MEQVQVSQSG RTNTTMLVGE HIDSLATVLD LVRSGAARTR PEIGRRSGLG RTVVTQRVNQ LMACGLLEEG ALGPSSGGRA PRELKFRAHA GVILAAELGA TSINVGVVDL AGTVLAEHSE DADIAAGPEA VLERVEEVLD ELLDQVRAEQ NDPDLTVWGV GIGLPGPVEF ATGRPSAPPI MPGWDGYPVR DRLARRYNTP VWVDNEVNTM ALGELRAGSA RGQRDILYVK IGTGIGAGLV SGGTLHRGSQ GCAGDIGHAA VSDETEVVCR CGNIGCLEAY AGGAALARDG LSAAQEGRSR LLAEVLADTG TITAADISRA AQSGDRTSVE LLTRAGRFIG GLLATLVSFF NPALVIIGGG VAGAGDLLLA AVRETVYRRS LPLATRELRI IRSTLNDRAG LVGAAFMVID ELFTPERLAR WVTEGSPAGS PELVHVPLRT PLP
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