| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_14690 |
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| Symbol | |
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| ID | 8386802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1515582 |
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| End bp | 1518053 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975548 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_003133336 |
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| Protein GI | 257055504 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.423913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATG TCAGCGGCAA TGACACACAG GCCGTGCACG AAACGGAAGC CGTGATCGAC
AACGGGCGGT TCGGTCAGCG CACGGTCCGA TTCGAGACGG GCAGACTCGC GCGACAGGCA
GCCGGGTCCG TCGTCGCGTA CCTGGACGAC GAGACGATGG TGCTGTCCGC CACCACCGCG
TCCAAACAGC CCAAGGAACA GTTCGACTTC TTCCCGCTGA CGGTGGACGT CGAGGAGCGG
ATGTACGCGG CCGGGCGTAT CCCCGGTGCG TTCTTCCGTC GGGAAGGTCG CCCGTCCACC
GACGCGATCC TGACCTGCCG GCTCATCGAC CGTCCCCTGC GTCCCTCGTT CGCGGAGGGG
CTGCGTAACG AGATCCAGAT CGTCGTGACG GTGCAGAGCC TGCACCCGGA CGACCCCTAC
GACGTGCTCG CCATCAACGC GGCGTCGGCT TCCACCCAGA TCGCCGGACT GCCGTTCTCC
GGCCCCATCG GTGGAGTGCG GCTCGGGCTG ATCGACGGCG AGTGGGTCGC CTTCCCGACC
TGGTCGCAGC TGGAGCGCGC CACGTTCAAC ATGGTCGTGG CGGGTCGTAT CGTCGGGGAT
CGTCCCGAGG ACGTCGCGAT CATGATGGTC GAGGCGGAGG GGACCGAGAA CACCCTCGAC
CTCATCGCGA ACGGGGCCAC CGCGCCCACG GAGAAGACCG TGGCCGAGGG CTTGGACGCG
GCCAAGCCGT TCATCCGGGT GCTGTGCGAG GCGCAGCAGC GACTCGCCGA CGTGGCGGCG
AAGCCGGTGG GTGAGTTCCC GCTGTTCCCG GACTACGAAC AGGACGCCTA CGACGCGGTC
GCGGCCATCG CGACCGACGG CCTCGCCAAG GCGCTCACGA TCGCGGGCAA GCAGGAACGC
GAGAACGCGA TCGACGAGGT GAAGAACGCG GTGCTCGAGC GCGTCGGAAT CGGCGAGGGC
GAGGCGTTCG AAGGCCGTGA GAAGGAGATC GGCGCGGCGT TCCGCGCGCT GACCAAGAAG
CTGATCCGGC AGCGCATCCT GCGCGACAAG GTGCGTATCG ACGGCCGCGG CGTGACGGAC
ATCCGGCAGC TGGCCGCCGA GGTGTCGGTG GTGCCGAGGG CGCACGGCTC GGCCCTGTTC
GAGCGGGGCG AGACCCAGAT CCTGGGGGTC ACCACGCTCA ACATGCTCCG TATGGAGCAG
CAGCTCGACA CCCTGTCGCC GGAGACGACG AAGCGTTTCC TGCACCATTA CAACTTCCCG
CCGTACTCCA CCGGGGAGAC GGGCCGGGTG GGCACGCCGA AGCGCCGTGA GATCGGCCAC
GGCATGCTCG CCGAGCGCGC GCTCGTACCC GTGGTACCGA AGCGGGAGGA GTTCCCGTAC
GCGATCCGGC AGGTCTCCGA GGCACTGGGC TCCAACGGGT CCACCTCGAT GGGCTCGGTG
TGCGCGTCCA CGATGAGCCT GCTCAACGCC GGGGTGCCGC TGAAGGCGCC GGTGGCGGGT
ATCGCCATGG GGCTGGTGTC CGACGAGGTC GAGAACGAGA ACGGGGAGAC CGAGGTCCGT
TACGTGGCGC TCACCGACAT CCTCGGTGCG GAGGACGCCT TCGGTGACAT GGACTTCAAG
GTCGCGGGCA CCAGGGAGAT CATCACCGCG CTGCAGTTGG ACACGAAGCT CGACGGCATT
CCGTCCGACG TGCTCGCCGC GGCGCTGGAG CAGGCCCGGG ACGCTCGACT GACGATTCTG
GACGTCATGG CCGAGGCCAT CGACGGTCCG GACGAGATGA GCCCGTACGC ACCGCGCGTG
ACGAGCCTGA AGGTGCCGGT CGACAAGATC GGCGAGGTCA TCGGCCCGAA GGGCAAGATG
ATCAACTCGA TCACCGAGGA GACCGGTGCC GACATCTCCA TCGAGGACGA CGGCACGATC
TACGTCGGTG CCGCCGACGG CCCCTCGGCC GACGCTGCCA TCGAGAAGAT CAACGCCATC
GCCAACCCGC AGCTGCCGAA GGTCGGTGAG CGGTACCTCG GCACCGTGGT GAAGACGGCG
GCGTTCGGTG CGTTCGTGTC GCTGCTGCCC GGCAGGGACG GCTTGGTGCA CATCTCCAAG
TTGGGCAACG GCAAGCGCGT GGCCAAGGTC GAGGACGTGG TGCACGTCGG CGACAAGCTG
CAGGTGGAGA TCGCCGACAT CGACAGCCGC GGCAAGATCA GCCTCGTGCT CGTCAAGGAC
GAGGACGAGG AAGGAGAGGC CGCCGAGTCC GGCAAGGGGC AGTCCTCGGC TCAGGAAGCC
CCCGAACGGG ACAAGCCCGC GAAGGCGGGT AGGGGCGACA AGGGGCCGAG GCCTGACCGG
CCGCGTCAGC GCACCCGTCG TGGCGGACGT GGCCGTGGCG GCGAGAGGGG CGGTCGCGGT
GAGAAGTCGG ACCAGCAGCA GTCCGACGCG AAGGGCACCG CCTCGACGAG CGGCCCGGCC
GACCTGGAGT AA
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| Protein sequence | MTDVSGNDTQ AVHETEAVID NGRFGQRTVR FETGRLARQA AGSVVAYLDD ETMVLSATTA
SKQPKEQFDF FPLTVDVEER MYAAGRIPGA FFRREGRPST DAILTCRLID RPLRPSFAEG
LRNEIQIVVT VQSLHPDDPY DVLAINAASA STQIAGLPFS GPIGGVRLGL IDGEWVAFPT
WSQLERATFN MVVAGRIVGD RPEDVAIMMV EAEGTENTLD LIANGATAPT EKTVAEGLDA
AKPFIRVLCE AQQRLADVAA KPVGEFPLFP DYEQDAYDAV AAIATDGLAK ALTIAGKQER
ENAIDEVKNA VLERVGIGEG EAFEGREKEI GAAFRALTKK LIRQRILRDK VRIDGRGVTD
IRQLAAEVSV VPRAHGSALF ERGETQILGV TTLNMLRMEQ QLDTLSPETT KRFLHHYNFP
PYSTGETGRV GTPKRREIGH GMLAERALVP VVPKREEFPY AIRQVSEALG SNGSTSMGSV
CASTMSLLNA GVPLKAPVAG IAMGLVSDEV ENENGETEVR YVALTDILGA EDAFGDMDFK
VAGTREIITA LQLDTKLDGI PSDVLAAALE QARDARLTIL DVMAEAIDGP DEMSPYAPRV
TSLKVPVDKI GEVIGPKGKM INSITEETGA DISIEDDGTI YVGAADGPSA DAAIEKINAI
ANPQLPKVGE RYLGTVVKTA AFGAFVSLLP GRDGLVHISK LGNGKRVAKV EDVVHVGDKL
QVEIADIDSR GKISLVLVKD EDEEGEAAES GKGQSSAQEA PERDKPAKAG RGDKGPRPDR
PRQRTRRGGR GRGGERGGRG EKSDQQQSDA KGTASTSGPA DLE
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