| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_14620 |
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| Symbol | |
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| ID | 8386795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1509035 |
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| End bp | 1510351 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644975541 |
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| Product | putative efflux protein, MATE family |
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| Protein accession | YP_003133329 |
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| Protein GI | 257055497 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.220591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.503837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACC TGATGCCGCA ACGTGTGCCC GCCCGTGAGG TGTGGCGACT CGCCGTTCCC
GCGCTGGGTG TGCTGGCCGC CGAGCCGCTC TACGTTCTCG TGGACACCGC TGTGGTCGGC
CACCTGGGTG CGTTGCCGTT GGCGGGACTC GCCCTCGGCG GCACGTTGTT GTCGCTGGTG
TCCACGCAGT TGACTTTTCT GTCCTACGGG ACCACCGCGC GCACGGCGCG TCTGCACGGC
GCGGGTCGGC GTGCCGACGC CGTGGGAGAG GGCGTGCAGG CGACGTGGTT GGCGCTCGCC
GTCGGGCTCG CGGTGTTGGT GGTGGGACAG CTCGTGGCCG AACCGGTCGC CCGACTGATG
TCGGGTGATC CGGCTGTGGC GGAGCAGACG GTGTCGTGGC TACGCATCGC CCTGTGCGGT
ACGCCGATGA TCCTCGTCAC GATGGCGGGC AACGGCTGGA TGCGCGGTGT CCAGGACGCC
GCGCGCCCAC TGCGGTACGT CCTCGCGGGC AACGCGTTGT CGGCCGCGCT GTGTCCCGTG
CTCGTGTATC CGGTGGGCTG GGGACTCGAA GGGTCGGCCG TCGCCAACGT GGTCGCCCAG
ACCGTGTCGG CGAGCCTGTT CATCCGGGCG TTGATCCGCG AGGGTGTCTT CCGCCGGCCG
CAGCCATCGG TGATGTGGGC GCAGTTGCGG CTCGGACGGG ACCTCGTTCT GCGCAGCCTG
GCGTTCCAGG CGTGTTTCCT GTCCGCGACG ACCGTGGCGG CCCGCACCTC CACCGAGGCC
GTCGGCGCTC ACCAGGTGGT GTGGCAGCTG TGGACGTTCC TGGCGTTGGT GCTGGACTCG
GTGGCCATCG CCGCGCAGTC GTTGATCGGT GCCGCCCTGG GTGCGCACGA CTCCCGGCGC
GCCCGAGGCA TCGCCTCGCA GATCGTTTCC TACGGGCTCG TCTTCGGCTG TGTGCTCGCG
GTGGTGTTCG CCGCCGCTTC CCCGGTGCTG CCGGGACTGT TCACCACCGA TGCGGGCGTG
CTCGCCGCCA TCCCGTACGC ATGGTGGTTC TTCGTCGCGC TGCAACCGGT CGCGGGAGTG
GTGTTCGCGC TCGACGGTGT GCTCCTCGGC GCGGGCGATG CCACGTTCCT CCGCAACGCC
ACGCTCGGCA GCGCGGTGCT CGGTTATCTG CCGTTGATCT GGATGTCGTT GGCGTTCGGC
TGGGGGCTCG CCGGCATCTG GACCGGACTG TCGCTGTTCA TGCTGCTGCG GATGGGATTC
GTGGTGGCCC GGTGGCGGTC GGGAGGCTGG GCCGTGGTGG GCGCCGTTCG GACGTGA
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| Protein sequence | MTDLMPQRVP AREVWRLAVP ALGVLAAEPL YVLVDTAVVG HLGALPLAGL ALGGTLLSLV
STQLTFLSYG TTARTARLHG AGRRADAVGE GVQATWLALA VGLAVLVVGQ LVAEPVARLM
SGDPAVAEQT VSWLRIALCG TPMILVTMAG NGWMRGVQDA ARPLRYVLAG NALSAALCPV
LVYPVGWGLE GSAVANVVAQ TVSASLFIRA LIREGVFRRP QPSVMWAQLR LGRDLVLRSL
AFQACFLSAT TVAARTSTEA VGAHQVVWQL WTFLALVLDS VAIAAQSLIG AALGAHDSRR
ARGIASQIVS YGLVFGCVLA VVFAAASPVL PGLFTTDAGV LAAIPYAWWF FVALQPVAGV
VFALDGVLLG AGDATFLRNA TLGSAVLGYL PLIWMSLAFG WGLAGIWTGL SLFMLLRMGF
VVARWRSGGW AVVGAVRT
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