| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_14550 |
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| Symbol | nusA |
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| ID | 8386788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1502015 |
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| End bp | 1503061 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975534 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_003133322 |
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| Protein GI | 257055490 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01952] NusA family KH domain protein, archaeal
[TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0106294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGTCG ACATCGCGGC GTTGCGCGCG ATCGAAGCGG ACAAGGACAT CCCCTTCGAG
ACGGTGCTGG AAGCCATCGA GAGCGCGTTG CTCACGGCGT ATAAGCACAC CGAGGGCCGC
CAGCCGCACG CCAGGATCGA CATCGACCGG AAGACCGGGT ACGTGCGCGT GATCGCGTAC
ACGCTCGACG AGAACGGCGA GGTCGTCGAG GAGTGGGACG ACACCCCCGA GGGGTTCGGC
CGGATCGCTG CCGCCACCGC TCGACAGGTC ATCCTGCAGC GTCTGCGGGA TGCGGAGCAC
GAGAAGACCT ACGGCGAGTT CTCGGCACAG GAAGGCGAGA TCGTGGCCGG CGTCGTGCAG
CGCGATGCCA AGGCCAACGC CAGGGGCATG GTGATCGTCC AGGTCGGCGA CACCGAGGGT
GTGCTGCCTC CCGCGGAGCA GGTGCCGGGC GAGGTGTACG AGCACGGTGC GCGGCTCAAG
GCGTACGTCG TGGGGGTGTC CCGCACCGCC CGTGGGCCGC AGATCACGCT GTCGCGCACC
CATCCGAACC TGGTGCGGAA GCTGTTCGCT CTTGAGGTCC CCGAGATCGC CGACGGCACT
GTCGAGATCA CGGCCGTGGC CAGGGAGGCG GGCCACCGGT CGAAGATCGC CGTTCGGTCC
ACCGTGCCCG GCGTCAACGC CAAGGGCGCT TGCATCGGGC ACGTGGGCGC TCGAGTGCGC
AACGTCATGA GCGAGCTCGG TGGCGAGAAG ATCGATATCA TCGATCACTC GGACGACCCG
GCGCGTTTCG TCGGGAATGC TCTGTCGCCC GCGAAGGTTG TATCTGTCGA CGTGGTCGAC
GAGCGGACCA AGACGGCCCG GGTCATCGTG CCGGACTTCC AGTTGTCTCT GGCAATCGGT
AAGGAAGGTC AGAATGCGCG GCTCGCGGCC CGACTCACCG GGTGGCGGAT CGACATTCGC
AGTGATGCGG CCCCCGAACC CGGGGAGCAG CAGCACATGG ACCCGGCCGA GAAGCGGCAT
CCGGCAGCGA CCGGTTCCGC TGACTGA
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| Protein sequence | MNVDIAALRA IEADKDIPFE TVLEAIESAL LTAYKHTEGR QPHARIDIDR KTGYVRVIAY
TLDENGEVVE EWDDTPEGFG RIAAATARQV ILQRLRDAEH EKTYGEFSAQ EGEIVAGVVQ
RDAKANARGM VIVQVGDTEG VLPPAEQVPG EVYEHGARLK AYVVGVSRTA RGPQITLSRT
HPNLVRKLFA LEVPEIADGT VEITAVAREA GHRSKIAVRS TVPGVNAKGA CIGHVGARVR
NVMSELGGEK IDIIDHSDDP ARFVGNALSP AKVVSVDVVD ERTKTARVIV PDFQLSLAIG
KEGQNARLAA RLTGWRIDIR SDAAPEPGEQ QHMDPAEKRH PAATGSAD
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