Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_14540 |
Symbol | |
ID | 8386787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1501479 |
End bp | 1502018 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975533 |
Product | hypothetical protein |
Protein accession | YP_003133321 |
Protein GI | 257055489 |
COG category | [S] Function unknown |
COG ID | [COG0779] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.110302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCAACG AACTCGCCAG CAGGCTGGAG CCACTCGTGG CCGAGGCCGT CGGGGCCGCG GGTTTTGATC TTGACGCGCT GGATGTGCAG CAGGCAGGCA GACGCAAGCT GGTGAAGGTC GTGGTCGACG GTGACGAGGG TGTCGAGCTC GACAAGGTCG CCGAGATCAG CAGGGCGGTG TCCGCGGTGC TTGACCAGCA CGACCATCTC ATCGCGGGCG CCTATACGCT GGAGGTGACC TCGCCCGGTC TCGACAGGCC GCTTACGAAG CCCCGTCATT GGCGTAGGTC CCGGAACCGA CTGGTCCGGG TCACGCCGAA GGAGGGACCC GCGTACATCG GCCGTGTCGG TGCGGCGGGA GAGGACTCGG TACGCATACT GGTCGACGGG GAGATACGCG ATCTACGCTA CGCCGACGTG CGCAAGGCCG TGGTGGAGGT CGAGTTCAAA CAGCCCCCCG CCGAGGAGCT CAGGCTGCTG GAAACCGATA GTTACGGCAA GATCGGGGAA GGCGCCGGAA CGAGGGAGGA GTCGAGGTGA
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Protein sequence | MPNELASRLE PLVAEAVGAA GFDLDALDVQ QAGRRKLVKV VVDGDEGVEL DKVAEISRAV SAVLDQHDHL IAGAYTLEVT SPGLDRPLTK PRHWRRSRNR LVRVTPKEGP AYIGRVGAAG EDSVRILVDG EIRDLRYADV RKAVVEVEFK QPPAEELRLL ETDSYGKIGE GAGTREESR
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