Gene Svir_14540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_14540 
Symbol 
ID8386787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1501479 
End bp1502018 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content66% 
IMG OID644975533 
Producthypothetical protein 
Protein accessionYP_003133321 
Protein GI257055489 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.110302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAACG AACTCGCCAG CAGGCTGGAG CCACTCGTGG CCGAGGCCGT CGGGGCCGCG 
GGTTTTGATC TTGACGCGCT GGATGTGCAG CAGGCAGGCA GACGCAAGCT GGTGAAGGTC
GTGGTCGACG GTGACGAGGG TGTCGAGCTC GACAAGGTCG CCGAGATCAG CAGGGCGGTG
TCCGCGGTGC TTGACCAGCA CGACCATCTC ATCGCGGGCG CCTATACGCT GGAGGTGACC
TCGCCCGGTC TCGACAGGCC GCTTACGAAG CCCCGTCATT GGCGTAGGTC CCGGAACCGA
CTGGTCCGGG TCACGCCGAA GGAGGGACCC GCGTACATCG GCCGTGTCGG TGCGGCGGGA
GAGGACTCGG TACGCATACT GGTCGACGGG GAGATACGCG ATCTACGCTA CGCCGACGTG
CGCAAGGCCG TGGTGGAGGT CGAGTTCAAA CAGCCCCCCG CCGAGGAGCT CAGGCTGCTG
GAAACCGATA GTTACGGCAA GATCGGGGAA GGCGCCGGAA CGAGGGAGGA GTCGAGGTGA
 
Protein sequence
MPNELASRLE PLVAEAVGAA GFDLDALDVQ QAGRRKLVKV VVDGDEGVEL DKVAEISRAV 
SAVLDQHDHL IAGAYTLEVT SPGLDRPLTK PRHWRRSRNR LVRVTPKEGP AYIGRVGAAG
EDSVRILVDG EIRDLRYADV RKAVVEVEFK QPPAEELRLL ETDSYGKIGE GAGTREESR