Gene Svir_14510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_14510 
Symbol 
ID8386784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1498583 
End bp1499587 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content73% 
IMG OID644975530 
Producthypothetical protein 
Protein accessionYP_003133318 
Protein GI257055486 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACTG CTTTCGGGGC TGAGTTCGAG CTCGTCGACG GTTATCTGAA CACCCCTTCC 
ATCGGCGTTC CGCCGCTGCA CGTCGCCGAG GCGGTGGAGG GGTTCGTGCG GGACTGGCGG
ACCGGGGCGC AGCGAGCGGC CGATTTCGAC GCGCTCGTGG ACGACACGCG GGCGTCGTTC
GCCCGGCTCG TCGGCGTACC CGCCGAACGC GTGGCCGTGG GCCCGGCCGT CTCGCCGTTG
GTCGGCATGG TGGCGCAGGC GGTGCCCGAC GGCTGCCGGG TCCTCACCGT CGAGGGGGAG
TTCACGAGCG TGACCTTCCC CTTCGCCGTT CAAGCCGATC GTGGGGTGCA GGTCACCGAG
GTGCCGTTGG CCGGACTCGC GGAAGAGGTG GGGCGACACG ATCTCGTGGC GGTGAGCGTC
GTGCAGTCCG CGGACGGGGC CGTCGTCGAT CTCGGGGCGC TGCGGGCCGC CGCCGTACCC
GTGCTGCTCG ACGTCACCCA GGCCGCCGGC TGGATGCCCC TGGAGCTCGA CTGGGCCGAT
TGGGTGGTCT GTGCCGGGTA CAAGTGGCTG CTGGCTCCCC GGGGCGCGGC TTGGCTGGCG
GTGCACCCGA GGGCGGTCGA GTGGACCCGG CCCGTCGCCG CCTCCTGGTA CGCCGGGCAG
GACCGATGGC ACAGCGTCTA CGGTCTGCCG TTGCGGTTGG CCGACGGCGC GCGCGCCGGT
TCGACATCTC CCCGGCGTGG CCGGCGTTCG CGGGCGCGGC ACCGGCGTTG TCCTACCTCG
CGTCCCTCGA CCTCGACGCC GTGCGAGCCC ACGGGGTCGG CCTCGCCGAC CGACTCAGGG
CCGCCGTCGG ACTCCCCGCC CAGGGAAGCC CCATCGTGGC GCTGGGTTTC AAGGACCCGG
TGGAACGGCT GGCCGAGGCG GGGGTGGTCG CCGGTGCCCG GGCGGGCCGC GCTCGGCTCG
GCTTCCATAT CTACAACACG GAGGCCGATG TCGAACGGGT GGTGA
 
Protein sequence
MRTAFGAEFE LVDGYLNTPS IGVPPLHVAE AVEGFVRDWR TGAQRAADFD ALVDDTRASF 
ARLVGVPAER VAVGPAVSPL VGMVAQAVPD GCRVLTVEGE FTSVTFPFAV QADRGVQVTE
VPLAGLAEEV GRHDLVAVSV VQSADGAVVD LGALRAAAVP VLLDVTQAAG WMPLELDWAD
WVVCAGYKWL LAPRGAAWLA VHPRAVEWTR PVAASWYAGQ DRWHSVYGLP LRLADGARAG
STSPRRGRRS RARHRRCPTS RPSTSTPCEP TGSASPTDSG PPSDSPPREA PSWRWVSRTR
WNGWPRRGWS PVPGRAALGS ASISTTRRPM SNGW