| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_14460 |
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| Symbol | |
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| ID | 8386779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1492547 |
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| End bp | 1493494 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975525 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003133313 |
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| Protein GI | 257055481 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGTTCCC AACGCGACCG TCCGGTAAGC GAAGAACCCG ACATCGTGCG CTACTACCTT
GACGAAGTCG GCGAGACCCC TCTGCTGACC GCCAACCAGG AGGTGGAGCT CGCCAAGCGC
ATCGAGGCCG GAGTCTACGC GGCCGAATTG CTCCGCCGTG CCGACGAGGG CGAGATCACC
CTCGACTACG ACCGTCGGGA CCTGGAGATC GTCGCTCGCG ACGGGCAGCG CGCCAAGGAT
CACATGATCC GGGCCAACCT CCGTCTCGTG GTGACGGCGG CGCGGAAGAA CCGCCACACG
AACCTGCCGC TGCTGGACGC GATCCAGGAG GGCAACCTCG GACTGATCCG GGCCGTGGAG
AAGTTCGACT ACGCCAAGGG CTTCAAGTTC TCTACCTATG CTATGTGGTG GATCCGGCAG
GCGATCCAGC GCGGCAACGC GTTCCAGAGC AACGCCATCC GGCTGCCGAT GCACGTCAGC
GAGCAGGTGG CCAAACTGGA CCGGCTGGAA CGCACACTGC AGTCGCGCAG TAACCACGAG
CTCACGGTGG AGGAACTGGC CGCCGCGGCC GAGATGCCCG TGGAGCGGGT CGAAGCGCTG
CGCCAGGCCG GTCGATCCAC CGTCAGCCTG GACATGTCCC TCGACGAGGA CGGCGAGCTG
TACCTGCGCG ACCTCGTGGC CGACGGGACC GTGCCCGCTG TCGGCGAGGG CATCGAGCGG
CAGGCCATGG TCGACCAGGT GCGGGCCACG ATCGACAGTC TTCCGCCCAT GGAGGCGGCG
GTGGTGTCGC TGCGGTACGG CCTGCGGGAC GGTCACCAGC ACACGATCCC GGAGATCTCG
CAGCGTCTCG GCCTGAGCCG CAAGCGGGTG CGCACACTCG AACAGCGCGC CATGGCCATG
CTGCGGGAGC CGCAGCGCAG TGAACCTCTG TTGGACTGGG CGAGCTGA
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| Protein sequence | MGSQRDRPVS EEPDIVRYYL DEVGETPLLT ANQEVELAKR IEAGVYAAEL LRRADEGEIT
LDYDRRDLEI VARDGQRAKD HMIRANLRLV VTAARKNRHT NLPLLDAIQE GNLGLIRAVE
KFDYAKGFKF STYAMWWIRQ AIQRGNAFQS NAIRLPMHVS EQVAKLDRLE RTLQSRSNHE
LTVEELAAAA EMPVERVEAL RQAGRSTVSL DMSLDEDGEL YLRDLVADGT VPAVGEGIER
QAMVDQVRAT IDSLPPMEAA VVSLRYGLRD GHQHTIPEIS QRLGLSRKRV RTLEQRAMAM
LREPQRSEPL LDWAS
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