Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_14410 |
Symbol | |
ID | 8386774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1487882 |
End bp | 1488643 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975520 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_003133308 |
Protein GI | 257055476 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0513449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTTGG AGCTCGAAGG TGCCGTGAAC GCCCGTGACG TCGGCGGGAT CCCCACCAAC GACGGAGCGA AGATCGCTCC CGGTCGACTG CTGCGGTCGG ACAATCTCCA GGACCTCTCC CCCGCCGACG TGGCGCTGTT GGTGAACAAC ATGGCGCTCG ACACGGTGGT GGACCTCCGT TCGCCCCTGG AAGTGGCCGC CGAAGGACCC ACACCGTTGA CCCGGTTGGA CCACATCACC CACGTCAACC ATTCCCTGCT GCCCGAGATC GGCAAGGACG TCACCGCCGA GGCGCTGCTC GTCCGCCGAC GGCGGGAGGA GGAACGCTAC CCCGACGACC CGGCATGCGC GCACTACCTC GGGTACGTGG AGAACCGACC CGACAGCATC GTCGCCGCGC TGCGGGCCAT CGCCCGCGCA TCCGGGACGG CGCTGGTGCA CTGCGCAGCG GGTAAGGACC GCACCGGCGT CGTCGTGGCC TTCGCGCTCA CCGTGGCCGG GGCGCGCCGG GAGGAGATCA TCCGCGATTA CGCGGCCACC AACGAGCGGT TGCCCCTCAT CCTGGAACGC CTACGCAGCA CGCCCACCTA CTCCGGGGAC ATCGACAGCG TGCCCGAGGA TCGCCACCGG CCCCGTGCCG AGACGATGGA GGCGTTTCTG GAACAGGTGG ACCGCCGCTA CGGCGGTGTG GAGGGCGTAC TCGGACGTCA CGGGTTCGGT GACGACGAGC TGGAGGCCCT GTACCGCAAG TTGCGGGACT GA
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Protein sequence | MWLELEGAVN ARDVGGIPTN DGAKIAPGRL LRSDNLQDLS PADVALLVNN MALDTVVDLR SPLEVAAEGP TPLTRLDHIT HVNHSLLPEI GKDVTAEALL VRRRREEERY PDDPACAHYL GYVENRPDSI VAALRAIARA SGTALVHCAA GKDRTGVVVA FALTVAGARR EEIIRDYAAT NERLPLILER LRSTPTYSGD IDSVPEDRHR PRAETMEAFL EQVDRRYGGV EGVLGRHGFG DDELEALYRK LRD
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