| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_14320 |
|---|
| Symbol | |
|---|
| ID | 8386765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1477059 |
|---|
| End bp | 1478228 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644975511 |
|---|
| Product | galactokinase |
|---|
| Protein accession | YP_003133299 |
|---|
| Protein GI | 257055467 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0153] Galactokinase |
|---|
| TIGRFAM ID | [TIGR00131] galactokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGACA CAGCGGTCCG GTTCGACGTC ACCGAGGTGT CCGCGGCCTT CACCGCGGCC
TTCGGTCGCC AACCCGACGG TGTGTGGGCC GCGCCGGGAC GGGTGAACAT CATCGGAGAG
CACACGGACT ACAACGACGG TTTCGTGCTA CCCATGGCAC TTCCCCAGGG GGTGCGCGCG
GCGGTGGGGC GGACGACGGA CTCCCGGGTG CGTGTGGTGT CGCGGCAGGA GCCGGGTGCC
CCGGTGACCG TCGGGCTCGA CGCGAAGCCG GGCGCGGTCA CCGACTGGTC CGCTTACGTC
ATCGGCGTGG TGTGGAGTCT GCGGGAGGCC GGCTACGACG TCGGAGGGGT CGACATCGCC
GTGGACGGCG ACGTACCGGC CGGTGCGGGA CTGTCGTCGT CGGCGGCGCT GGAGTGCGCG
GTGGCCGGTG CCCTGAACGA CCTGTTCGAG TTGCGCATCG AGCCCACCGA ACTCGCGCGA
CTGGCCCAAC GGGCGGAGAA CGAGTTCGTG GGGATGCCGT GCGGGGTGAT GGACCAGATG
GCGTCCGTGT CGTGTACGGC GGGCCATCTG CTGTTCTTGG ACACCCGGTC GATGGCCACC
GAACAGGTGC CGTTCGCCCC GGCCGACCGA GACCGCACGT TGCTCGTGAT CGACACCCGC
GCCCCGCACA AACTCGTCGA CGGTGAGTAC GCCCGGCGAC GCCGGACGTG TGAGGAGGCG
GCGTCCGTGC TGGGCGTGGC CGCGCTGCGA GACGTCTCCG TCGACGAGCT CCCCGTCGCA
TTGTCCCGAA TGGACGATGA AGTACAGCGT CGTCGCGTAC GGCACGTCGT CACCGAGAAC
GCCCGCGTGC TGGAGGTCGT GCGCAGGTTG CGTGACGGCG ACCTCGACGG CATCGGGCCG
CTGCTCACCG CCTCGCACGT CTCGCTGCGG GACGACTACG AGGTCACCGT GGGCGAGCTC
GACACCGCCG TGGACACCGC GCTCGCCACG GGCGCGCTGG GCGCCAGGAT GACCGGGGGC
GGTTTCGGAG GGTGCGTGAT CGCGCTCGTG CCCACCGACC GCGCCGACGC GGTGGTCGAC
GCGGTTCGGG GGGCGTTCGA GCGGGCCGGT TACCGCGAGC CGGCGGCCTT CACCGCCGTC
CCGGCCCAGG GGGCTCACCG AGTCCGTTGA
|
|---|
| Protein sequence | MEDTAVRFDV TEVSAAFTAA FGRQPDGVWA APGRVNIIGE HTDYNDGFVL PMALPQGVRA
AVGRTTDSRV RVVSRQEPGA PVTVGLDAKP GAVTDWSAYV IGVVWSLREA GYDVGGVDIA
VDGDVPAGAG LSSSAALECA VAGALNDLFE LRIEPTELAR LAQRAENEFV GMPCGVMDQM
ASVSCTAGHL LFLDTRSMAT EQVPFAPADR DRTLLVIDTR APHKLVDGEY ARRRRTCEEA
ASVLGVAALR DVSVDELPVA LSRMDDEVQR RRVRHVVTEN ARVLEVVRRL RDGDLDGIGP
LLTASHVSLR DDYEVTVGEL DTAVDTALAT GALGARMTGG GFGGCVIALV PTDRADAVVD
AVRGAFERAG YREPAAFTAV PAQGAHRVR
|
|---|
| |