| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_14170 |
|---|
| Symbol | |
|---|
| ID | 8386750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1460050 |
|---|
| End bp | 1460523 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644975496 |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_003133284 |
|---|
| Protein GI | 257055452 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.353401 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCATG ACGGTCCGGT CGACGAGGTC GATGCCAAAC TCCTGTTGGA ACTGACCCGG
CACCCCCGTG CGACCACCCT CGCTCTCGCC GACCGCGTCG GCATCTCCCG CAACACGGCC
CAATCCCGGC TCACCCGTCT GGAGGGGAAC ACTCTCGACT CGTTCGAGCG CCGCATCCCA
CCGGCCTCGC TGGGATATCC GCTCACCGCG TTCATCACCG CCCAGGTGAC CCAGCGCCGG
CTCGACGAGG TCGCCGAAGC GCTCGCCGAG ATCCCCGAAG TGCTGGAGGT GCACGGCATC
TCCGGACCGG TGGACCTGCT GATCCACGTG GTCGCCCGCG ACGCCGACGA CCTCTACCGC
ATCGCGGGTC GCATCCTCGC CATCCCCGGG ATCGAGCGCA CCAACACCAG CTTGGTGATG
CGGCGACTCG TGGATTACCG GATCACCCCG CTGCTCCGCC GCGCGGCCGA ATGA
|
|---|
| Protein sequence | MPHDGPVDEV DAKLLLELTR HPRATTLALA DRVGISRNTA QSRLTRLEGN TLDSFERRIP
PASLGYPLTA FITAQVTQRR LDEVAEALAE IPEVLEVHGI SGPVDLLIHV VARDADDLYR
IAGRILAIPG IERTNTSLVM RRLVDYRITP LLRRAAE
|
|---|
| |