Gene Svir_14090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_14090 
Symbol 
ID8386742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1450727 
End bp1453582 
Gene Length2856 bp 
Protein Length951 aa 
Translation table11 
GC content68% 
IMG OID644975490 
Productpenicilin amidase 
Protein accessionYP_003133278 
Protein GI257055446 
COG category[R] General function prediction only 
COG ID[COG2366] Protein related to penicillin acylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGAC TTTCGCGCAC TGTGGCCGTG TTCGCCGTCG CGGCCGTGGT CGGTACCGGC 
TTGACCGCAC CTCCCGCGAG TGCACGCCAC GCGCCCCTGC CCGAGCCGGC CCCGGACTAC
TGCGGCGAGC AGTGTCACGA CATCCTGCCG CCCGGCCAGA GCGGCAACGC CACCTTCATC
GAGCTCATCG GCCACCTGCT GTTCGGCACC CTGCCGAAAC ACTCCGGGGA TCAACTCGAC
GCCTACGACG AACTCGCCGC CCGGTATTCG AGCCTGACCA CCGACACCAT CGACGAGTTC
TTCAACGACC ATTCGTTCGG CGTTCCCGCG GACCAGGTCG AGCGGAGTTA CCGGCCGCGC
GAGGACGTCA CCATCGTCCG CGACAAATCC ACCGGGGCTC CCCACATCAC CGGCACCACC
CGGTCCGGGA CCATGTTCGG CGCCGGATAC GCCGCCGCCG AGGACAAGCT CTTCCTCATG
GACGTGATGC GCCGGGCCGG GCGGGGGACG GTCTCCTCGT TCGCCGGGGG CGCACCCGCG
AACCGTGCGC TGGAGCAGCA GTTCTTCGCC GCCGCGCCGT ACACCGAGGA GGAACTGCAA
CAACAGCTCG ACGACGTCGC CCGCAAGGGC GAACGCGGCG CCCAGGCGAT CGAGGACCTC
GAGTCCTATG TGGAAGGGAT CAACGCCTAC ATCGAGAAGG CGCACCGGGG ACGTTACTTC
CCCGGTGAGT ACGTCGCCAC CGGACACATC GACGCGATCA CGAACAAGGG GCGTATCGAG
CCGTTCAAAC CGACCGACAT CGTCGTGCTC GCCGCGTTGA TCGGTGCCCA GTTCGGCGGT
GGCGGTGGTA ACGAGGTGCA GAACGCCATC GCCCGCCTGG AACTGCACGA ACGATTCGGC
GTCGAACGTG GAGAGGAGAT CTGGAGGGTC TTCCGCGCCG AGAACGACCC CGAGGCCATC
AGCACCATCC ACGACGGACA GGTCTTCCCG TACGGCAACG CGCCCGAGGA CCCGGAGGGC
GTCGTGTGGC CGGACCGGGG CTCGGTGATC GAACAGCAAC TCGTGTTCGA CCCGACCGGA
TCGGCCGCCG AGCGCGTCGA CACGGCCGCG AAGAACGCCG CGCCGAGGAG GCACGACGTG
CCACGGCCGG ACTCGGACGA TCAGACCGAG GTACTGCGCG GGATCTTCGA CGACGGTGTC
CTGCCCGAGA GTCTGGGCCG GGCTCGGGGC ATGTCCAACG CGTTGGTCGT GTCGGGCGCC
CACACCGACA GCGGACACCC GGTCGCAGTG TTCGGACCCC AGACCGGCTA CTTCGCACCC
CAACTGCTCA CCCTCCAGGA GTTGCAGGGG CCGGGGATCT CGTCGAAGGG CGCGTCGTTC
GCGGGCCTGA GCTTCTACAC CCTGCTCGGT CGCGGCCAGG ACTACGCCTG GAGCGCCACC
ACGGCGGGTC AGGACATCAT CGACACCTAC ACCGTGGAAC TGTGTGAACC GGACGGTGGC
CCGGCCACCA TCCACTCGTC GTCCTACCTG TTCCGCGGCG AATGCGTGCC GATGCGCACG
GTGGAACGAC ACAACGAGTG GGAACCCAAC CTCGGTGACT CGACCCCGAA GGGTTCGTAC
CGGTTGGTGT CGTTCCGCAC CCACTACGGT CCGGTGACCC ACCGCGGCAC CGTCGACGGC
AAGCCCGTGG CGTTCACGAC GGTGCGGTCG ACGTTCCTGC ACGAGATCGA TTCGATCATC
GGGTTCCAGA AGTTCAACGA TCCCGAGGCC ATCACCTCGG CGGAGGACTT CCAGCGCGCC
GCCCACGACA TCAACTTCAC GTTCAACTGG TTCTACGTCG ACGCCGACGA CGCCGCGTAC
TTCAACTCCG GGGCGAACGT CGTGCGCCCG CCACAGGTCG ATCCGAGCAT GCCGATCGCC
TCGGACCCCG CCTACGAGTG GGAGGGCTGG AACCCGGACG ACAACACCGC GCGGTACATG
TCGTTCGAGG AACATCCCCA TTCGATCAAC CAGGACTACT ACATCAGTTG GAACAACAAA
CAGGCACCGG GAACGGCGGG CGCACTGCCG GAGAAGGGCG CCGTGCACCG CGGGGACCTG
CTGGACCACC GGATCGCCGA ACGTCTGGAG GCAGGTGACA CGTTCGACCG GGTCAGTCTG
ACCCAGGTCA TGGCCGAGGC CGGGGTCACC GACCTGCGTG CCGAACGGGT CCTGCCCGAT
CTGCTGCGGC TGATCGACAC CGAGCCCGTC GACGACCCCG AACTGGCCGC GCGCGTCGAC
GAGTTGCGGG AGTGGTCGGA GGACGGCGGT CGGCGGGTGG AGACCGAACG CGGCAGCCAC
GTCTACGAGC ACGCGTCGGC GATCCAGCTG ATGGACGCGT GGTGGCCGCT GCTGGTGCGG
GGCATGTTCG AACCGGAGCT GGGCACCCCG GCCTACCAGG CGTTGACCGA TGTGCTGCGC
ATCAACGAGT CGCCCTCCGG TTGGCAGAAC GGGGAGCCGG GACTGCAGTC CGGCCAGGGG
CACCAGGGCT CGGCGTTCCA GCACGGCTGG TTCGGACAGG TGTCCAAGGA CGTTCGGGTG
GCGCTCGGTG ACGATGTGCC CGGCGGGCTC GACGAGTCGC TGTGCGGAGG AGGCGACGCG
TCGGCGTGCC GCCAGGTGCT GCTGGACACG TTGGCCGAGG CGGCCGTGAC CCCGGCGGAG
GAGGTCTACC CGGGTGATGC GGAGTGCGAG GCCGGTGACC AGTGGTGCGC CGACGCCATC
GTGCACTCCA AGATCGGCGG CATCGGCCAC AAGAAGGTGA CCTGGCAGAA CCGCCCGACC
TACCAGCAGG TCGTGGAGTT CCCCTCCCGC CGCTGA
 
Protein sequence
MSRLSRTVAV FAVAAVVGTG LTAPPASARH APLPEPAPDY CGEQCHDILP PGQSGNATFI 
ELIGHLLFGT LPKHSGDQLD AYDELAARYS SLTTDTIDEF FNDHSFGVPA DQVERSYRPR
EDVTIVRDKS TGAPHITGTT RSGTMFGAGY AAAEDKLFLM DVMRRAGRGT VSSFAGGAPA
NRALEQQFFA AAPYTEEELQ QQLDDVARKG ERGAQAIEDL ESYVEGINAY IEKAHRGRYF
PGEYVATGHI DAITNKGRIE PFKPTDIVVL AALIGAQFGG GGGNEVQNAI ARLELHERFG
VERGEEIWRV FRAENDPEAI STIHDGQVFP YGNAPEDPEG VVWPDRGSVI EQQLVFDPTG
SAAERVDTAA KNAAPRRHDV PRPDSDDQTE VLRGIFDDGV LPESLGRARG MSNALVVSGA
HTDSGHPVAV FGPQTGYFAP QLLTLQELQG PGISSKGASF AGLSFYTLLG RGQDYAWSAT
TAGQDIIDTY TVELCEPDGG PATIHSSSYL FRGECVPMRT VERHNEWEPN LGDSTPKGSY
RLVSFRTHYG PVTHRGTVDG KPVAFTTVRS TFLHEIDSII GFQKFNDPEA ITSAEDFQRA
AHDINFTFNW FYVDADDAAY FNSGANVVRP PQVDPSMPIA SDPAYEWEGW NPDDNTARYM
SFEEHPHSIN QDYYISWNNK QAPGTAGALP EKGAVHRGDL LDHRIAERLE AGDTFDRVSL
TQVMAEAGVT DLRAERVLPD LLRLIDTEPV DDPELAARVD ELREWSEDGG RRVETERGSH
VYEHASAIQL MDAWWPLLVR GMFEPELGTP AYQALTDVLR INESPSGWQN GEPGLQSGQG
HQGSAFQHGW FGQVSKDVRV ALGDDVPGGL DESLCGGGDA SACRQVLLDT LAEAAVTPAE
EVYPGDAECE AGDQWCADAI VHSKIGGIGH KKVTWQNRPT YQQVVEFPSR R