| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_13900 |
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| Symbol | |
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| ID | 8386725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1433910 |
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| End bp | 1434620 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644975473 |
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| Product | CRISPR-associated protein Cas5 |
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| Protein accession | YP_003133262 |
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| Protein GI | 257055430 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.872767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.507161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACGC TCGTGCTGCA CCTGGACGGT CCCATGCAGG CGTGGGGCCA CGCTTCCCAG
TGGGATCACC GCGACACTCT CGACTATCCC ACCCGGTCCG GGGTGATCGG GATGATCGCT
GCCGCGCTCG GCAAACAATG GGGCGACAGT CTCGACGATC TCTCCCCACT ACGGTTCACC
ATCCGCATCG ACCGGCCTGG ACGTCGGATC GTGGACTACC ACACCGCTGG CGGAGGCTAC
GAAGTCGGGA TCGCACGAGT CAAAGGCGGC AACCGGGCTC ATGCCGTTCT CTCCGACCGA
TTCTACATGT CCGACGCCGC GTACACGGTC GCCATCACCG GACCCGACAC GCTCCTCTAC
CGAGTAGACG ACGCGCTCCG CGCGCCGGTG TTCGGCCCGT TCCTCGGTCG CCGGTCCTGC
CCGCCCGCAG GGCCGTGGCA TCTCGGCCTC CATGACGGTG ATCCGTTACG AACACTGCCA
CTACACAGGG ACAAACCCCG CGACGGTGAC ACCGTGGCTG TGGAGTTCGT GTCCGACCAC
GAAACACACG GCCCCACGGA TCGAGTGGAC ACCACACTCA CGGATCCACA CGAATTCGGC
CCCCGCCGCT CGTACGGGAC CGTCACCACC CACCGTTGGA CCGAAACCCT GCCTGTCGCT
ATGTGTGGCG GAACCGGGAT CCAGTGGTTC GACGCACTCA CCACTGTTTG A
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| Protein sequence | MTTLVLHLDG PMQAWGHASQ WDHRDTLDYP TRSGVIGMIA AALGKQWGDS LDDLSPLRFT
IRIDRPGRRI VDYHTAGGGY EVGIARVKGG NRAHAVLSDR FYMSDAAYTV AITGPDTLLY
RVDDALRAPV FGPFLGRRSC PPAGPWHLGL HDGDPLRTLP LHRDKPRDGD TVAVEFVSDH
ETHGPTDRVD TTLTDPHEFG PRRSYGTVTT HRWTETLPVA MCGGTGIQWF DALTTV
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