Gene Svir_13780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13780 
Symbol 
ID8386714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1419252 
End bp1420379 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content70% 
IMG OID644975462 
Productserine protease inhibitor 
Protein accessionYP_003133252 
Protein GI257055420 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4826] Serine protease inhibitor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.216143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0648597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAAC GCGATGCCGT CCAAGCTCAT CTGAATTTCG CCCTCGCCGT GCACCGAGCG 
TCGGGCTCAC CCAACGGCAA TGCGTGCTTC TCGCCGTACT CGGTGGCGGG CGCGTTGGGG
CTGGTCACCC GTGCGGCCAG AGGGGAGACC GCCTCCCAAC CGGCCGCGCT GTTGGCGGGC
GCACCGGAAC GCGTGTCCGA ACAGGCCGAC CTGTTGCGTG CGGCGGCCGT GCTCGACGCC
CCGGCCAGGG GGCAGGACGA GCCGACGTTG GCGGTGTCCA ACACGTTGTG GGTGTGGCGT
CGGTTGGAGG TGAAACCCGG TTTCACCGAC GTCGTGGCCG AGTGGCCCTC GGGCGCGGTG
GCCACGGCAC CGTTCGTGGA GGACCCGGAG GCCGCGCGGA CCACCATCAA CGCCGACGTG
GCCCGCACGA CCCGCGATCT CATCCCCGAA CTCCTGCTGC CGGGCACCAT CGGTGGTGAC
ACGGTGGCGG GCCTGGTCAG CGCGCTGTAT CTGAAGGTGG CGTGGACCAA TCCGTTCCGG
GACACCGACA CCGTCGAGGA CGACTTCCAC ACCCCGACAG GTGTCGTCCG GGTACCGATG
ATGCGGCAGG CCGAACGCCT CGGCTACGCC CGGCACGCGG GTTGGCAGCT GGTGGATCTG
CCCGCCGTCG GAGGGGTGAG CGCGTCGGTG TTGCTACCCG ATCGCCCCTT GGTCGAGGCC
GAGCCCGAAC TCGACGCCGC GACGGTGGAC GCGTTGTTGA ACGCGCGCCG TGAGGCGATG
GTGCGGTTGA CGATGCCCCG ACTGTCGCTG GACGTGCGCT GCCCGCTGAA GGACACGCTG
AACTCGTTGG GCGTGCGCAC GATGTTCACA CCGACCGCGG ACTTCGGTGA ACTCAGCGAT
GACCCCCGGC TGTTGGTGTC CGATGTCCTG CACCAGTCGG TGCTGCGCCT CGACGAGAAC
GGCCTGGAAG GTGCTGCGGC CACCGCGGCC ATGATGCGGT TGGTGTCGGC CCCCGCGGGA
GAGCCCGTCA CCGTGGAGGT GAACCGTCCG TTCCTGTTGC TGGTGCGGCA TCGGGCCAGC
GGGGCGGTCT ACTTCCTGGC TCGGGTGACC GAACCGTGGT CGCGCTGA
 
Protein sequence
MPERDAVQAH LNFALAVHRA SGSPNGNACF SPYSVAGALG LVTRAARGET ASQPAALLAG 
APERVSEQAD LLRAAAVLDA PARGQDEPTL AVSNTLWVWR RLEVKPGFTD VVAEWPSGAV
ATAPFVEDPE AARTTINADV ARTTRDLIPE LLLPGTIGGD TVAGLVSALY LKVAWTNPFR
DTDTVEDDFH TPTGVVRVPM MRQAERLGYA RHAGWQLVDL PAVGGVSASV LLPDRPLVEA
EPELDAATVD ALLNARREAM VRLTMPRLSL DVRCPLKDTL NSLGVRTMFT PTADFGELSD
DPRLLVSDVL HQSVLRLDEN GLEGAAATAA MMRLVSAPAG EPVTVEVNRP FLLLVRHRAS
GAVYFLARVT EPWSR