Gene Svir_13730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13730 
Symbol 
ID8386709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1413418 
End bp1414716 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content69% 
IMG OID644975457 
ProductO-acetylhomoserine aminocarboxypropyltransferase 
Protein accessionYP_003133247 
Protein GI257055415 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2873] O-acetylhomoserine sulfhydrylase 
TIGRFAM ID[TIGR01326] OAH/OAS sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.125718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.166001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG GATGGTCGTT CGAGACCAAG CAGATCCACG CGGGGGCGCA GCCCGACCCG 
ACGACCGGGT CCCGCGCCAC GCCGATCTAC CAGACGACCT CCTACGTCTT CCGGGACACC
CAGCACGGCG CTGACCTGTT CAGCCTGGCC GAGCCGGGCA ACATCTACAC GCGGATCATG
AACCCGACCC AGGACGTGTT GGAGCAGCGG GTCGCCGCGT TGGAGGGCGG TGTGGCTGCG
CTGGCGTTCT CCTCCGGGTC GGCCGCCACC ACCGCTGCGG TGTTGAACGT CGCGGGCGCG
GGAGACCACG TGGTGTCCAG CCCGGCCCTG TACGGCGGGA CGTACAACCT GTTCAAGTAC
ACCCTGGCCA AGCTCGGCGT CGAGGTGACG TTCGTGGAGG ACCAGGACGA CCTCGACGCG
TGGCGGGCCG CGGCCAAGCC GAACACCAAG TTGTTCTTCG CCGAGACCCT GGCGAACCCG
GGCAGCAACG TGCTCGACAT CCGCGGTGTG GCCGACGTGG CCCACGAGAT CGGTGTGCCG
CTGGTCGTGG ACAACACCAT CCCCACGCCG TATCTGTTGC GGCCGATCGA GCACGGCGCC
GATGTCGTGG TGCACTCGGC GACCAAGTAC CTCGGCGGGC ACGGCACCAC GATCGCGGGT
GTGCTCGTGG ACGGCGGTAC GTTCGACTTC GGCGCGCACC CGGAGCGGTT CCCCGGGTTC
AACGAGCCCG ACCCCAGCTA CCACGGTCTC AAGTACTGGG AGGCCCTGGG GCCGGGGGCG
TTCGCGACGA AGGCGCGCGT GCAGTGGCTG CGTGACACGG GCTCGGCCAT CGCCCCGCTG
AACAGCTTCC TCATCCTGCA GGGCATCGAG ACGCTGTCGC TGCGCATGGA GCGGCACGTC
TCCAACGCCC AGGCGCTGGC CGAGTGGCTG GAGCAGCGGG ACGAGGTGGA GAAGGTCTAC
TACGCCGGTC TGCCGTCCAG CCCGTACTAC GAGGCGGCGA AGAAGTACCT GCCGAAGGGT
GTGGGCGCCG TGGTGTCGTT CGAACTGCGC GGCGGTGTCG AGGCCGGACG TGCGTTCGTG
GACGGCACCG AGTTGCACAG CCAGCTGGTG AACATCGGTG ACGTGCGCAG CCTGATCGTG
CACCCCGCCA GCACCACGCA CAGCCAGCTC ACCCCGCAGG AGCAGCTCGC GGGCGGGGTG
ACGCCGGGAC TGGTGCGGCT GGCCGTGGGG TTGGAGGGCC TTGAGGACCT CAAGGCGGAC
TTGGAGGCCG GTTTCCGGGC GGCGAAGGCG GTTCAGTGA
 
Protein sequence
MSEGWSFETK QIHAGAQPDP TTGSRATPIY QTTSYVFRDT QHGADLFSLA EPGNIYTRIM 
NPTQDVLEQR VAALEGGVAA LAFSSGSAAT TAAVLNVAGA GDHVVSSPAL YGGTYNLFKY
TLAKLGVEVT FVEDQDDLDA WRAAAKPNTK LFFAETLANP GSNVLDIRGV ADVAHEIGVP
LVVDNTIPTP YLLRPIEHGA DVVVHSATKY LGGHGTTIAG VLVDGGTFDF GAHPERFPGF
NEPDPSYHGL KYWEALGPGA FATKARVQWL RDTGSAIAPL NSFLILQGIE TLSLRMERHV
SNAQALAEWL EQRDEVEKVY YAGLPSSPYY EAAKKYLPKG VGAVVSFELR GGVEAGRAFV
DGTELHSQLV NIGDVRSLIV HPASTTHSQL TPQEQLAGGV TPGLVRLAVG LEGLEDLKAD
LEAGFRAAKA VQ