| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_13700 |
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| Symbol | |
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| ID | 8386706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1410445 |
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| End bp | 1411125 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975454 |
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| Product | sortase (surface protein transpeptidase) |
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| Protein accession | YP_003133244 |
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| Protein GI | 257055412 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.808415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGAG GGTGCCGGTC GCTGCTGTGG CAGCGCAGGG TCGCCGCGGT GCTGGGGGTG
CTCTCCCTGG TCGCGGTCAC GGTCGGGGTC ACGCTGTTAC GTAATGCCCC GACTCCCCGG
GCGGAATCGC CCGCCGACGT TGAACGTCCC GTCGTGGACG TCGCCGACCC ACTCCGCGCG
CCCGCTTCCT CCGAACCCGT TCGAAAGACC ACCACGGCCG TGCCGCCACC GCAGCCTCCG
GGCACCGTTC GACTGGCCGG TGCGTCCGAG GCGTCCATGT TGGTCCGTAC GGCGCTCGCC
GACGACGGCA CGTTGCCGAT CCCCGCCGGG GTCGACCGGG TCGCGTGGTG GGGCGCCGAC
TTCGGTGCCG AGCGCGGGGT GTCCCTCGTC GCCGGACATG TGAACTGGCA TGGGACTAAC
GGTCCGTTCG CCGCGTTGTG GGGCCACCGT GTCGGTGATG AGGTGACCGT GCGTGATCCC
GAAGGTCGTG AGTGGGTGTA CCGCGTTGTG GGCGCCGAGA CGGTGCGGAA AAGCGAGTTG
GCCACACGGG CTCCCGAGCT GTTCGCTCAG GACGGTCCTC ATCGGCTGGT CCTCGTCACA
TGCGGAGGTG ACTACCTCGG TGGTACGGAC GGGTACTCCG ACAACCACAT CGTCACCGCC
GAACTGGTGA GTGCACCCTG A
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| Protein sequence | MTRGCRSLLW QRRVAAVLGV LSLVAVTVGV TLLRNAPTPR AESPADVERP VVDVADPLRA
PASSEPVRKT TTAVPPPQPP GTVRLAGASE ASMLVRTALA DDGTLPIPAG VDRVAWWGAD
FGAERGVSLV AGHVNWHGTN GPFAALWGHR VGDEVTVRDP EGREWVYRVV GAETVRKSEL
ATRAPELFAQ DGPHRLVLVT CGGDYLGGTD GYSDNHIVTA ELVSAP
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