Gene Svir_13680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13680 
Symbol 
ID8386704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1408809 
End bp1409228 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content68% 
IMG OID644975452 
Producttranscriptional regulator, ArsR family 
Protein accessionYP_003133242 
Protein GI257055410 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.55199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGAGCA TCATGGCGAC GGCGAGCTCC GACGCGACGC GTTCGGGCTC GTCTGACGCC 
AGTGAACTGG GCGAACGCCG AGAGCACTCC CCCGGACGGC AACCTCCGGC CGCTGTCGCA
CCGCCCTCGG CCGCCACCCT CACCGATGCG GGTGAACTTC TGCGAGCGCT GGCCGCCCCC
GTACGGATCG CGATCGTGTT GCAGCTCCAC CACGGTCCAC GCTGCGTACA CGAACTGGTG
GACGCGCTGA ACATGGCCCA GCCATTGATC AGCCAGCACC TCCGGGTGCT GAAAACGGCC
GGAGTGGTAC GGGGTGAGCG GCGAGGCCGC GAGGTGGTGT ACCACTTGGT GGACGACCAC
CTGGCCCACA TCGTCGTGGA CGCCGTCACA CACGTGCAGG AGGATGCGCA GCCGGTATGA
 
Protein sequence
MESIMATASS DATRSGSSDA SELGERREHS PGRQPPAAVA PPSAATLTDA GELLRALAAP 
VRIAIVLQLH HGPRCVHELV DALNMAQPLI SQHLRVLKTA GVVRGERRGR EVVYHLVDDH
LAHIVVDAVT HVQEDAQPV