Gene Svir_13620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13620 
Symbolera 
ID8386698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1404237 
End bp1405139 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID644975446 
ProductGTP-binding protein Era 
Protein accessionYP_003133236 
Protein GI257055404 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.475105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGG CTGAGCATCG CTCGGGGTTC GCGTGTTTCG TCGGCAGGCC CAACGCCGGC 
AAGTCCACGC TGACCAACGC GCTGGTGGGT TCGAAGGTCG CCATCACGTC GAGCAAACCG
CAGACCACCC GGCACGCCAT CCGCGGCATC GTGCACCGGG AGGATGCGCA GCTCATCATC
GTGGACACCC CGGGGCTGCA TCGCCCCCGC ACGCTGTTGG GCCAACGTCT CAACGACATC
GTGCGGGCCA CGTGGTCCGA GGTGGACGTC GTCGGTTTCT GTGTGCCGGC GGACGAGAAG
ATCGGGCCGG GTGACCGGTT CATCGCCAAC GAACTGACGA AGATCGCGCG TCGGACACCG
GTGCTCGGCA TCGTCACGAA GACCGACCTC GTGAGCAAGG AGCAGGTCGC CAAACAACTG
CTCGCCTTGC AGGACGTCAT GGACTTCGCC GACCTGATCC CCGTGTCGGC CGTCGACGGC
TACCAGGTGG ACACGTTGGC GGATCTGTTG GTGGCGCGGC TGCCGGAGGG GCCGGAGCTG
TATCCGGACG GGGACCTCAC GGACGAACCC GAGCAGACGC TGGTGGCGGA GCTGATCCGA
GAGGCGGCGT TGGAAGGTGT GCGCGACGAG CTTCCGCATT CCATCGCCGT GGTCGTCGAG
GAGATGTATC CGCGTCCCGG CCGCGACGAC CTCGTCGACA TCTACGCCCA CGTGTATGTG
GAGCGCCCCA GTCAGCGGGG CATCGTGCTC GGTCACCGCG GCAGTCGACT CAAGGACGTC
GGAGCGCGGG CTCGTCGACA GATCGAGGCG TTGCTGGGCA GCAAGGTGTA CCTCGACCTG
CACGTCAAGG TGGCCAAAGA CTGGCAACGT GATCCGAAGC AACTCCGCCG ACTCGGTTTC
TGA
 
Protein sequence
MSEAEHRSGF ACFVGRPNAG KSTLTNALVG SKVAITSSKP QTTRHAIRGI VHREDAQLII 
VDTPGLHRPR TLLGQRLNDI VRATWSEVDV VGFCVPADEK IGPGDRFIAN ELTKIARRTP
VLGIVTKTDL VSKEQVAKQL LALQDVMDFA DLIPVSAVDG YQVDTLADLL VARLPEGPEL
YPDGDLTDEP EQTLVAELIR EAALEGVRDE LPHSIAVVVE EMYPRPGRDD LVDIYAHVYV
ERPSQRGIVL GHRGSRLKDV GARARRQIEA LLGSKVYLDL HVKVAKDWQR DPKQLRRLGF