| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_13500 |
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| Symbol | |
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| ID | 8386686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1392811 |
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| End bp | 1394520 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975434 |
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| Product | choline dehydrogenase-like flavoprotein |
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| Protein accession | YP_003133224 |
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| Protein GI | 257055392 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCGGT TCGACTACGA CGTCGTCGTC ATAGGTTCCG GGTTCGGCGG GAGCGTCAGC
GCTCTGCGGC TCACGGAGAA GGGCTACCGA GTGGGTGTGC TGGAGGCGGG CAGACGGTTC
GCCGACCACG AGTTCGCGAA GACGTCGTGG CGCGTACGCG ACTACCTGTT CGCCCCGTTC
CTCGGCTGCA CCGGGATCCT GCGTATCACT TTCCTGCCCG ACGCACTCGT CCTCAGCGGC
GCCGGGGTGG GCGGTGGCTC GTTGGTGTAC GGCAACACGC TGTACGAACC ACCCGGCACC
TTCTACGCCG ATCCCCAGTG GGCGCACATC ACGGACTGGA AGGAAGAACT CGCACCGTAC
TACGACCAGG CCAAACGCAT GCTCGGGGTG ACGACGAATC CGTGGCCGAC CCCGTCCGAC
GAAGTGATGC GGGAGGTGGC CGACGACCTG GGGGTGGGAC ACACCTACCG TCCGACCCCC
GTCGGCGTCT TCTTCGGCCC GGACGGCACC CGACCCGGAA CGCGCGTGGC CGACCCGTTC
TTCGGTGGTG TCGGTCCCGA CCGCCGCACC TGTCTGCACT GCGGTGAATG CCTCACCGGC
TGCCGCCACG GGGCGAAGAA CACCACGGTC AAGAACTACC TTCACCTCGC GGAAGCCGCG
GGCGCCACCG TCCATCCCCT GACGACGGTG ACCGGGATCC GCCCACGGCC CGGCGGCGGT
TACGTGTGCA CCGCCGTCCA CACGAAGCAA CCCTGGCGCA AGCGGACCTA CACGGCCGAA
CAGGTGGTAC TGGCGGCCTC GGCGCTGGGC ACCCAGCGTC TCCTGCATCG CATGCGTGAC
CGTGGAATGC TCCCTCGGCT CTCCCCACGT CTGGGGGTAC TCGCCCGGAC GAACTCCGAA
GCCGTCCTCG CCGCACGAAC CACTCGCCGC GATGCGGGGT ACCACCGCGG GGTGGCGATC
AGTTCCTCGC TTCATCCCGA CGAGGTCACC CACATCGAAC CGGTGCGTTA CGGCAAAGGC
AGCAATCTGC TCGCGCTCCT CGGCGCCGTC CTGACCGACC CCGTTCCGGG CAGACCACGG
TGGTTGGCGG GCCTGTCGGA GATGGTGCGT CAGCGACGCG CACTACCCGC CTTGCACAAT
CCCCGCCGCT GGTCGGAACA GACGATCGTG CTGTTGGTGA TGCAATCACT CGACAATTCG
GTCACCACCT ACACCCGGCG CGGCCTGCTC GGCAGACGCA TGCTCACCAA ACAGGGCATC
GGCGAACCCA ATCCCACGTG GATCCCGATC GGCCACGAAG TGGCCCGTCG AGTGGCGGAC
AAGATCGGTG GAATCGCGGG AGCGGGCTGG AACGATCTGT TCAACCGACC CCTGACCGGA
CATTTCATCG GCGGCTGCAC CATCGGCGAC TCACCCGAAA CCGGGGTCGT CGACCCCTAC
CACCGCGTGT ACGGACACCC GGGGCTGCAT GTCGTGGATT CCTCGGCCGT GTCGGCCAAC
CTCGGTGTCA ACCCCTCGCT CACCATCACC GCACAGGCCG AACGCGCCAT GGCACTGTGG
CCCAACAAGG GCGATCCCGA TCCTCGACCC CCGCTGTCGG CAGCGTACGA ACGCATCGAT
CCGGTCCGCC CGAACCACCC GATCGTGCCT ACCGAGGCTC CCGGCGCACT TCGACTGCCC
ATCTTCCCGG CGAAAAGCAA GCCATCGTGA
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| Protein sequence | MVRFDYDVVV IGSGFGGSVS ALRLTEKGYR VGVLEAGRRF ADHEFAKTSW RVRDYLFAPF
LGCTGILRIT FLPDALVLSG AGVGGGSLVY GNTLYEPPGT FYADPQWAHI TDWKEELAPY
YDQAKRMLGV TTNPWPTPSD EVMREVADDL GVGHTYRPTP VGVFFGPDGT RPGTRVADPF
FGGVGPDRRT CLHCGECLTG CRHGAKNTTV KNYLHLAEAA GATVHPLTTV TGIRPRPGGG
YVCTAVHTKQ PWRKRTYTAE QVVLAASALG TQRLLHRMRD RGMLPRLSPR LGVLARTNSE
AVLAARTTRR DAGYHRGVAI SSSLHPDEVT HIEPVRYGKG SNLLALLGAV LTDPVPGRPR
WLAGLSEMVR QRRALPALHN PRRWSEQTIV LLVMQSLDNS VTTYTRRGLL GRRMLTKQGI
GEPNPTWIPI GHEVARRVAD KIGGIAGAGW NDLFNRPLTG HFIGGCTIGD SPETGVVDPY
HRVYGHPGLH VVDSSAVSAN LGVNPSLTIT AQAERAMALW PNKGDPDPRP PLSAAYERID
PVRPNHPIVP TEAPGALRLP IFPAKSKPS
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