Gene Svir_13480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13480 
Symbol 
ID8386684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1391503 
End bp1392165 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID644975432 
Productfructose-2,6-bisphosphatase 
Protein accessionYP_003133222 
Protein GI257055390 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCTA TCTACCTCGT GCGGCACGGC CAGGCTTCAT TCGGTGCCGC CGATTACGAC 
GTCCTGTCCG ACCTGGGTCG GATCCAGGCC CGTGCGACCG GGATCGAGTT ACTGCGTCGG
GGACTGGTGG TCAAACAGGC CCGGTGTGGC ACGTTGTCGC GGCAACGCGC GACGGCGGAG
TTGGCGTTGG CCGAGGTCGC GCCCGGGATC ACCGCCGAGG ACGATGCGCG ATGGAACGAG
TACGACCACG TCGACATCGC GGCACATCAT GGGGGCGGGG CGGCGCAGGA CAGCGCGGAC
CCGCGAGCGT ATCAGCACGC GTTGGAGAAA GCGCTGGTCG CGTGGGTCGA AGCGGGGGCC
GACAGTCCGT GTGCCGAGAG CTGGCCCGAG TTCTTGGCGA GGGTACGGGG TGCGTTCGAC
GAGGTCGTGA CGAGCCTCGG AAAAGGTGAA CAGGCGGTGG TGTTCACCTC CGGCGGGGTG
ATCGCGACGC TGTGCGGCGA TCTGCTCGGT GACCCCGTCA AGGGGCTACT GACCCTGAAC
AGGGTCACGG TGAACGCCGG TGTGACCAAA GTGGTCACGG GCCGATCGGG CACCACATTG
GTGTCGTTCA ACGAACACGG GCATTTCGAC GGGGAGTCGG CACATCTGCT GACTTACCGC
TGA
 
Protein sequence
MGAIYLVRHG QASFGAADYD VLSDLGRIQA RATGIELLRR GLVVKQARCG TLSRQRATAE 
LALAEVAPGI TAEDDARWNE YDHVDIAAHH GGGAAQDSAD PRAYQHALEK ALVAWVEAGA
DSPCAESWPE FLARVRGAFD EVVTSLGKGE QAVVFTSGGV IATLCGDLLG DPVKGLLTLN
RVTVNAGVTK VVTGRSGTTL VSFNEHGHFD GESAHLLTYR