Gene Svir_13130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13130 
Symbol 
ID8386649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1350556 
End bp1351410 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content69% 
IMG OID644975397 
Productcarbon monoxide dehydrogenase, medium subunit 
Protein accessionYP_003133187 
Protein GI257055355 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCCGG CTCCCTTCGA CTACGTAGTA CCCTCCACTG TGGAGGAAGC GGTACGCGCG 
CTCGTCGACG CGGGGGAAGA CGCGAAGGTG ATCGCCGGAG GCCAGAGTCT GCTGCCGGTA
CTGCGCCTGC GCATGGCCGC CCCCACCACA CTGATCGATC TCAACCGCAT CGGCGAGCTA
CGGGGAGTCC GCGATGAGGG GGACTTCCTC GTCATCGGCG CGATGACGAC CCACCACGAC
ATCCAACGCG ACCCCCTGAT CGCCGACCAC GCGGAGCTGC TCGCGAAGGC GACCGCGACG
GTGGCCGACC CCCAGATACG GCATCGTGGG ACCTTCGGTG GGTCCCTCGC GCATGCCGAT
CCGGCGGGTG ATCTGGCGGC ACCGGCACTG GCCTTGGACG CGGAGATGGT CCTGCACGGC
CCGGACGGTG CTCGTACGGT GCCCGCGGTG GAGTTCTTCC AGGACTTCTT CACCACCGCG
ATGCGACCGA ACGAGATCCT CACCGAGATC CGGGTGCCGA AATTCACCGG CTGGCGCGCG
CACTACGAGA AGTTCAACCG CGTGGCGCAG GCGTGGTCGA TCGTCGGTGT CGCCACCACG
GTGCGCACGG AGGCGGGCAC CATCGCCGAG GCCAGGGTCG GGCTGACCAA TATGGCTCCC
GTTCCGCTGC GGGCGTGGGC GGTGGAGGAG GCGCTCGTCG GGCAACCCGC CACCGCCGAA
GCGATTCGGG CGGCGGCTGA ACGCGCAGCG GAGGGGACGA GCCCGACCGC GGACGGTAAC
GCCGATGCGG AGTATCGCCA GCACCTCGCG CGGGTGCTGA CCGGCAGAGC CGTCTCCACG
GTGATAGGGG GCTGA
 
Protein sequence
MIPAPFDYVV PSTVEEAVRA LVDAGEDAKV IAGGQSLLPV LRLRMAAPTT LIDLNRIGEL 
RGVRDEGDFL VIGAMTTHHD IQRDPLIADH AELLAKATAT VADPQIRHRG TFGGSLAHAD
PAGDLAAPAL ALDAEMVLHG PDGARTVPAV EFFQDFFTTA MRPNEILTEI RVPKFTGWRA
HYEKFNRVAQ AWSIVGVATT VRTEAGTIAE ARVGLTNMAP VPLRAWAVEE ALVGQPATAE
AIRAAAERAA EGTSPTADGN ADAEYRQHLA RVLTGRAVST VIGG