Gene Svir_13100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13100 
Symbol 
ID8386646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1346090 
End bp1347214 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content70% 
IMG OID644975394 
Productxanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
Protein accessionYP_003133184 
Protein GI257055352 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGACG TGCTGGACGA GTTGCACCGT CGTTGGTCTG CGGGCGAGAC GGTGGGGGTG 
GGGACCGTCG TGGCCACCTT CTCCTCGGCG CCCCGCGCGC CGGGGGCCGC GATGCTGGTG
GGTGCCGACG GTGAGGTGGT CGGCAGCGTG TCCGGTGGCT GTGTCGAGGG CGCGGTGTAC
GAGCTGGCGC GGCAGGTGAC GGAGACGCGG ACCCCGGTGC TGCAACGTTA CGGCGTGAGC
GACGACGACG CCTTCGCGGT GGGGCTCACC TGCGGAGGCA TCATCGACAT CTTCGTCGAA
TGCGTGGACC AGCGGTCCAT GCCGGAATTG CCCGAGCTGA TCTCCTCCGT GGACGAGGGT
AGGCCGGTGG CCGTCACCAC GATCATCGAG CATCCCGATC CCGCGCTGCT CGGCAGACGC
ATGTTGGTGT GGCCGGACCG GGTCGGTGGA GGGTTCGGTT CGCAGCGGAT CGACGACGCC
GTGGTCGACG ACGCCCGTGG CCTGTTGGCC GGGGGGCGGT CGGGCGTATT GCGCTACGGC
CCCGAGGGGC AGCGCCGCGG TGAGGGGATG GCGGTGTTCG TCAACTCGTT CGAACCGCCC
CCGCGGATGC TGGTGTTCGG TGCCATCGAC TTCGCCGCCG CGATGGCGCG GATGGGTGCC
TACCTCGGCT ACGAGGTCAC GGTGTGCGAT GCGCGGTCCG TGTTCGCGAC GAAGACACGG
TTTCCCGAGG CCCACGAGGT GGTCGTGGAT TGGCCGCACC GCTACCTCAC GGCGGAGGCG
GAGGCCGGTC GCATCGATCC CCGGACCGTG ATCACCGTGC TCACCCATGA TCCGAAGTTC
GACGTGCCGG TGTTGGAGGT GGCCCTCCGG CTGGACGTCG CCTACGTCGG GGCGATGGGT
TCCCGCCGCA CCCACGAGGA CCGCATGCGG CGGCTGCGGG AGATCGGGAT GACCGATGCG
GAGCTCGCCC GACTGGCGTC GCCGGTCGGA CTCGACCTGG GGGCCCGCAC TCCGGAGGAG
ACCGCCGTGT CCATCGCGGC CGAGATCATC GCGCTGCGGT GGGGCGGTAG TGGGCGTCGG
TTGGTCGACC TCGACGGCCC CATCCACGGT GAGCAGGACG GCTGA
 
Protein sequence
MHDVLDELHR RWSAGETVGV GTVVATFSSA PRAPGAAMLV GADGEVVGSV SGGCVEGAVY 
ELARQVTETR TPVLQRYGVS DDDAFAVGLT CGGIIDIFVE CVDQRSMPEL PELISSVDEG
RPVAVTTIIE HPDPALLGRR MLVWPDRVGG GFGSQRIDDA VVDDARGLLA GGRSGVLRYG
PEGQRRGEGM AVFVNSFEPP PRMLVFGAID FAAAMARMGA YLGYEVTVCD ARSVFATKTR
FPEAHEVVVD WPHRYLTAEA EAGRIDPRTV ITVLTHDPKF DVPVLEVALR LDVAYVGAMG
SRRTHEDRMR RLREIGMTDA ELARLASPVG LDLGARTPEE TAVSIAAEII ALRWGGSGRR
LVDLDGPIHG EQDG