Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_13060 |
Symbol | |
ID | 8386642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1342485 |
End bp | 1343279 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644975390 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003133180 |
Protein GI | 257055348 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCAG GTAGTGGACG TGCCGCGCAC CACGTGCAGT CCCTCGAACG CGGACTGGCG GTGATCAAGG CGTTCGGCGC GGGCGCCCCG CAACTCACGC TCAGTGAGGT GGCGAAGGAG ACCGGGTTGA CGCGGGCCGC GGCACGCCGG TTCCTGCTGA CGTTGGCCGA TCTCGGTTAC GTCCGTTCCG ACGGCAGGTA CTTCAGCCTC ACCGCCAAGG TCCTCGAACT GGGGTACGCG TACCTGTCGA GCCTGTCTCT GCCCGAGGTG GTGCAGCCGC ACCTGGAGCG GTTGTCGGCG GAGGTGCACG AGTCCTGTTC GGTCTCGGTG CTCGACGGAA CCGACATCGT CTACGTCGCT CGGGTGGCGG TGTCGCGCAT CATGACCGTG AGCATCAACG TGGGCACCCG TTTCCCCGCC CACGCCACTT CCATGGGGCG GGTGCTGCTC GCCGGACTCG ACGAGGACGC ACTCGCCGAT TACCTGCGTG AGGTGACGTT CGACCGGTTG ACCGACCACA CGATCACCTC GGCCGAGAAG CTGCGGGCCG AACTGGACGC CGTGCGCGAG CAGGGGTGGG CGCTGGTCGA TCAGGAGTTG GAAGAGGGGC TGCGGTCCGT GGCCGCTCCC ATCCGAGACA GGTCTGGCAA GGTGGTGGCC GCCGTGAACA TCTCCACGCA CGCCAGCCGG ACGACACCCG AGTCGGTGCG TACCGGTCTG GTCCCGCCGT TGTTGGCGAC GGCGGCGCGG ATCGAGTCCG ATCTGGCCGT CGCCCCCGCG GCGCAGGTCT CATGA
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Protein sequence | MEAGSGRAAH HVQSLERGLA VIKAFGAGAP QLTLSEVAKE TGLTRAAARR FLLTLADLGY VRSDGRYFSL TAKVLELGYA YLSSLSLPEV VQPHLERLSA EVHESCSVSV LDGTDIVYVA RVAVSRIMTV SINVGTRFPA HATSMGRVLL AGLDEDALAD YLREVTFDRL TDHTITSAEK LRAELDAVRE QGWALVDQEL EEGLRSVAAP IRDRSGKVVA AVNISTHASR TTPESVRTGL VPPLLATAAR IESDLAVAPA AQVS
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