| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_13020 |
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| Symbol | |
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| ID | 8386638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1339345 |
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| End bp | 1339899 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975386 |
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| Product | protocatechuate 3,4-dioxygenase, alpha subunit |
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| Protein accession | YP_003133176 |
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| Protein GI | 257055344 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAGG CTGGCCCGAA GCTTCCCTCG ACTCCTTCAC AGACCGTGGG GCCGTATCTG
TCGATCGGCC TGCCGTGGGA GGACGGGCCC ACGGTGGTGG AAGAAGGCAC CGAGGGCGCT
GTATGGATCC GGGGTGTCGT CACCGACGGC GAGGGCGCGC CGGTTCCCGA CGCGTTGATC
GAGACGTGGC AGGCCGATCC GAACGGGCGA TTCGACCACC CCGATGACCC GAGGGGCGCT
GTCCCCGGTT TCCGGGGTTT CGGACGATGC CCCACGAACG ACGACGGTGA GTTCGGGATC
CTCACGCTGC TGCCGGGTGC GGTTCCGGAG CAGGCGCCGC ACATCAACGT GTCGGTGTTC
GCCCGTGGTC TGCTGAATCG GTTGGTGACG CGGATCTACT TCCCTGATTT CGCCGACGCC
AACGCGGCCG ACCCGGTGTT GAATTCGGTG CCCGAGGAGC GGCGACACAC TCTGGTGGCG
CGCAAGACGG AGGACGGCTA TCGCTTCGAC GTGCGGCTTC AGGGTGAGGG CGAGACAGTG
TTCTTCGATG TCTGA
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| Protein sequence | MSQAGPKLPS TPSQTVGPYL SIGLPWEDGP TVVEEGTEGA VWIRGVVTDG EGAPVPDALI
ETWQADPNGR FDHPDDPRGA VPGFRGFGRC PTNDDGEFGI LTLLPGAVPE QAPHINVSVF
ARGLLNRLVT RIYFPDFADA NAADPVLNSV PEERRHTLVA RKTEDGYRFD VRLQGEGETV
FFDV
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