Gene Svir_12870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12870 
Symbol 
ID8386623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1327429 
End bp1327725 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content65% 
IMG OID644975371 
ProductTranscription factor WhiB 
Protein accessionYP_003133161 
Protein GI257055329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA CGTCTCGCCT GCCCACTCCG GTCGCCGAGG TCTGGGAATG GCAGCGGCAC 
GGTAATTGCC GGAATCTCGA CAGCTCCGTG TTCTTCCATC CTGACGGAGA ACGCGGTTTT
GCGCGCGCCG ACAGGGTTGC GCGAGCCAAG GAGATCTGCC GTACCTGCCC GGTGATCGTC
CAGTGTCGGC ACCACGCGCT GACGGTGCAG GAGCCGTTCG GTGTCTGGGG CGGTCTCGAC
GAAACCGAAC GCAGGGAGGC GATCGCGCGG CGAAAAAAGC TTGAACCCAC GGCCTGA
 
Protein sequence
MADTSRLPTP VAEVWEWQRH GNCRNLDSSV FFHPDGERGF ARADRVARAK EICRTCPVIV 
QCRHHALTVQ EPFGVWGGLD ETERREAIAR RKKLEPTA