| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12830 |
|---|
| Symbol | |
|---|
| ID | 8386619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1322325 |
|---|
| End bp | 1324007 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644975367 |
|---|
| Product | sulfite reductase, beta subunit (hemoprotein) |
|---|
| Protein accession | YP_003133157 |
|---|
| Protein GI | 257055325 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCGA ATCCGGGTGG CACCACCCGC GCTCGACGAC CACGTGGTGA GGGACAGTGG
GCCCTCGGCT ACCGGGAACC GCTCAATGCG AATGAACGGT CCAAGAAGGA TGATCCACCG
CTGAACGTCC GAGAGCGGAT CGAGAACACC TACTCCCGGC AGGGATTCGA TTCGATCGAC
CCGAGCGATC TGCGTGGCCG TTTTCGATGG TACGGCCTCT ACACCCAGCG CAGACCCGGC
ATCGACGGTG GGAGGACGGC GACGCTGGAG CCGGAGGAGC TCGAAGACCG CTACTTCATG
ATGCGGGTAC GCATCGACGG TGGCGCGCTC ACCACGGAGC AACTCGCGCT CATCGGCGAA
CTGTCCCAGA CCTATGCCAG GAACACGGCC GACATCACCG ACCGACAGAA CGTCCAGTAC
CACTGGATCC GCATCGAGGA CGTCCCCACG ATCTGGGCGA GACTCGAAGC CGCCGGCTTG
ACCACCCTCG AGGCGTGCGG TGACAGTCCC CGTGTCATCC TCGGCTCCCC GGTGGCCGGT
ATCGCCGCCG ACGAGGTCCT CGACGCCACA CCGGCCATCG AGGAGATCCG ACGCCGTTAC
ATCGGCGCGC CCGAGTTCGC CAATCTGCCC CGCAAGTTCA AAACCGCCAT CTCCGGTCTA
CAGGACGTGG TCCACGAGAT CCACGACGTC GCGTTCGTCG GGGTCGAACA TCCCGAGCAC
GGGCCGGGGC TCGACCTGTG GGTGGGCGGC GGCCTGTCGA CGAATCCCAT GCTCGCCGTG
CGACTCGGTG CGTGGGTGCC GCTGGAGGAG GTCCCCGACG TGTGGGCGGG CGTCGTCGGT
GTGTTCCGTG ATTACGGCTA TCGCAGGCTC CGTTCCCGCG CCCGGTTGAA GTTCCTCGTC
AAGGACTGGG GTCCGGAGAG GTTCCGAGAG GTCCTGGAAA CGGAGTATCT CGGCAGGCCG
CTGATCGACG GGCCGGCTCC CGAGGCGCCC GAACGTCCCA TCGACCATGT GGGTGTCCAC
CGCCAGCGGG ACGGTCGTTA CTACGTGGGA GCGGCCCCGG TGGCCGGGCG GGCTTCCGGG
TCGATGCTCA CCGCGGTGGC CAAGGCCGCC GAACGTGCCG GTTCCACCCG CGTGCGCTTG
ACGCCGCAAC AGAAGTTGAT CGTGCTCGAC GTTCCGGAGT CCGAGGTCGA CAAACTGCGA
ACCGAACTCG CCGACGCTGG TCTGGACACC GCTCCCACAC CGTGGCGTCG CGGTGTCATG
GCTTGCACGG GCATCGAATT CTGCAAACTC GCCATTGTCG AGACCAAGGG GCGGGCCGAA
CGACTCGTCG CGGAATTGGA GCGACGACTG GCCGATCTCA ATAACGATCT CGATCACCCG
ATCAGCGTTC ACCTCAACGG TTGTCCCAAT TCGTGCGCGC GTATACAGAC CGCGGACATC
GGTCTTAAGG GGCAGATCGT CACCGACGCC GAAGGCAAGC AGGTCGAGGG TTTCCAGGTC
CATCTCGGCG GCGGTTTCGG GCTTGATTCG GGATTCGGCC GTAAACTGCG AAGGCACAAG
GTCACCGCCA CCGAATTGCC GGACTATGTG GAGCGTGTTG TGCGCAACTA CGTCGCCCAA
CGGGAGCACG GTGAACGGTT CGCCCAGTGG ATCGCTCGTG CCGAGGAAGC GGATTTGATA
TGA
|
|---|
| Protein sequence | MAPNPGGTTR ARRPRGEGQW ALGYREPLNA NERSKKDDPP LNVRERIENT YSRQGFDSID
PSDLRGRFRW YGLYTQRRPG IDGGRTATLE PEELEDRYFM MRVRIDGGAL TTEQLALIGE
LSQTYARNTA DITDRQNVQY HWIRIEDVPT IWARLEAAGL TTLEACGDSP RVILGSPVAG
IAADEVLDAT PAIEEIRRRY IGAPEFANLP RKFKTAISGL QDVVHEIHDV AFVGVEHPEH
GPGLDLWVGG GLSTNPMLAV RLGAWVPLEE VPDVWAGVVG VFRDYGYRRL RSRARLKFLV
KDWGPERFRE VLETEYLGRP LIDGPAPEAP ERPIDHVGVH RQRDGRYYVG AAPVAGRASG
SMLTAVAKAA ERAGSTRVRL TPQQKLIVLD VPESEVDKLR TELADAGLDT APTPWRRGVM
ACTGIEFCKL AIVETKGRAE RLVAELERRL ADLNNDLDHP ISVHLNGCPN SCARIQTADI
GLKGQIVTDA EGKQVEGFQV HLGGGFGLDS GFGRKLRRHK VTATELPDYV ERVVRNYVAQ
REHGERFAQW IARAEEADLI
|
|---|
| |