Gene Svir_12770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12770 
Symbol 
ID8386613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1316324 
End bp1317106 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content68% 
IMG OID644975361 
ProductEnoyl-CoA hydratase 
Protein accessionYP_003133151 
Protein GI257055319 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATGG CTGACGAACT GGTGCACTAC ACCACCGCGA CGGGGGTCGC CACGATCACC 
TTGGACTCCC CGCACAACCG CAACGCGCTG TCCGCCCCGC TGCGAGCACA ACTCGCCGCG
AGCCTGGACC GAGCCATCGA CGACGACACC GTGCGCGTGA TCGTGCTCGA CCACACCGGT
CCGGTCTTCT GCGCCGGAAT GGACCTCAAG GAGGCCAAGG GCGCGCATGC CGGCCAGCAA
GGCGTCAACG ACTTCCCCGC CCTGCTGCAG CGGCTGTGGA CGAGCCCGAA GCCGGTGATC
GCCAAACTCG CGGGTCCGGC GCGGGCGGGT GGCGTCGGGT TGGTCGCCGC CGCCGACATC
GCCGTCGCGG TGGAAGACGC CACGTTCGCC TTCACCGAGG TCCGTATCGG TGTCGTACCG
GCCGTGATCT CGGTGACCGT GTTGCCCCGC ATCGGCGCCC GCGCCGCCCA CGAACTGTTC
CTCACAGGCG AGGTGTTCGA CGCCCGACGG GCCGCTGAGA TCGGTCTGCT CAACGCCGCC
GTTCCCGCCG ACGAACTGGA CGCCACCGTC GAACGCTACG TCTTTTCGCT CTCCCTCGGA
GCTCCGACCG CCCTGGCCGC GACGAAGGAA CTGCTCCAGG GCGAGACGGC GCGCACCATG
CCCGAGACCT TCGAGAAGAT GCAGGCGCTC TCCGCACAGT TCTTCGCCGG TGAGGAAGGC
CAGGAGGGAA TCGCGGCGTT CACCGAGAAA CGCCTCCCGA ACTGGGTTCC CGAACGTTCC
TGA
 
Protein sequence
MGMADELVHY TTATGVATIT LDSPHNRNAL SAPLRAQLAA SLDRAIDDDT VRVIVLDHTG 
PVFCAGMDLK EAKGAHAGQQ GVNDFPALLQ RLWTSPKPVI AKLAGPARAG GVGLVAAADI
AVAVEDATFA FTEVRIGVVP AVISVTVLPR IGARAAHELF LTGEVFDARR AAEIGLLNAA
VPADELDATV ERYVFSLSLG APTALAATKE LLQGETARTM PETFEKMQAL SAQFFAGEEG
QEGIAAFTEK RLPNWVPERS