Gene Svir_12740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12740 
Symbol 
ID8386610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1314334 
End bp1315299 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content67% 
IMG OID644975358 
ProductZn-dependent oxidoreductase, NADPH:quinone reductase 
Protein accessionYP_003133148 
Protein GI257055316 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCCG TCTACGCCAA AGAACCGAAC GCTGACGATC CGTTGTCCTC GCTCGTCGTG 
GGTGAACGGC CCGATCCCGA GGTGCCCGAA GGCTGGGTCC GGGTGTCGGT GCGCGCTGCC
AGTCTCAACA TGCACGACAT CTGGACCCTC CGGGGGGTGG GGATCAAACC CGATCAATTC
CCCATGATCC TCGGCTGCGA TGGGGCCGGG GTGCTCGACG ACGGTAGCGA GGTGGTGCTG
CACTCGGTGA TCAACGATCC CGCGTGGCGC GGAGAGGAGA CGCTGGACCC GAAGCGGACC
CTGCTCACCG AGAAGTACCA GGGCACGTTC GCCGACAGTG TGGTGGTTCC CGCACGTAAC
GTGCTGCCCA AGCCCGCGGG GCTGTCCTTC GCGGAGGCGG CCACGATGGG CACCGCCTGG
TTGACCGCGT ATCGCATGCT GTTCGTCAAG TCCGGGTTGC GGCCGGGACA GACGATGCTG
GTGCAGGGTG CGTCCGGCGG GGTGTCCACG GCGCTCGTCC AGCTCGGCCG TGCCGCCGGT
TTCCGCGTGT GGGTGACGGG CAGGACGGAG GAGAAGCGGG CGTTGGCGGA GAGCCTCGGC
GCGCACGCCA CGTTCGAGCC CGGAGCGCGC CTGCCGGAAC GGGTGGACGC CGTCTTCGAG
ACCGTCGGTA AGGCCACGTG GTCCCACTCG TTGAAGTCAC TGAAACCGGG CGGGATCGTC
GTGGTCTCGG GCTCCACCAG TGGGCCCGAC CCGAGTGCCG ACCTACAGCG GGTGTTCTTC
CTTCAGCTGC GGGTGGTGGG CTCGACGATG GGTACGCGCG ACGAGCTGGC CGACCTGCTC
TCCTACGTCG ACCTGAAGGG GATTCGCCCG CAGATCGGCG CCGAGATGCC CATGACGGAA
GCCAAGCAGG GTTTCGCCGA CATGCTCGCC GGGAACACCG CGGGCAAGAT CGTCTTCACT
CGCTAG
 
Protein sequence
MFAVYAKEPN ADDPLSSLVV GERPDPEVPE GWVRVSVRAA SLNMHDIWTL RGVGIKPDQF 
PMILGCDGAG VLDDGSEVVL HSVINDPAWR GEETLDPKRT LLTEKYQGTF ADSVVVPARN
VLPKPAGLSF AEAATMGTAW LTAYRMLFVK SGLRPGQTML VQGASGGVST ALVQLGRAAG
FRVWVTGRTE EKRALAESLG AHATFEPGAR LPERVDAVFE TVGKATWSHS LKSLKPGGIV
VVSGSTSGPD PSADLQRVFF LQLRVVGSTM GTRDELADLL SYVDLKGIRP QIGAEMPMTE
AKQGFADMLA GNTAGKIVFT R