Gene Svir_12630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12630 
Symbol 
ID8386599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1305587 
End bp1306567 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content68% 
IMG OID644975348 
Producthypothetical protein 
Protein accessionYP_003133138 
Protein GI257055306 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.793346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGTC CAGCCACCAC ACCGCCCCCG CTGTATCTCG TGCTCGGCGA AGAAGAACTG 
CTCGTCGAAC GGGCCGTACG TGAGGCGGTC GACACCGCAC GTCTGGCCGA TCCGACGGCG
GAAGCCACCC GGGTGCGTGT GAGTGAACTC ACCCCGGCGC AATTCGCGGA GTTGGTCAGT
CCGTCACTTT TCAGCGAAGG CCGCGTCGTC GTGCTCGACG CGGCGCAGGA GATCTCCCAA
GAGAACGCCG ATGCCGTGCT GTCCTACGTC TCCGCCCCGG CTGACGGCAT CACGCTCGTG
GTCGTGCACA GCGGGGGAGG GCGGAGCAAA GCCGCGAAAT CGTTGCCTTC GGCGCTACGC
AAAGCCGGTG CGGTCGTCAC GGAATGTCCG AAGGTCACCA AACCCGCCGA ACGGGAGGCG
TTCGTCCGCA ACGAGGTACG TAGAGCGGGC GGACGGATCG ATGCGCCGGC CGTGGCGGCC
CTCATCGACG CGGTGGGTAC CGATCTACGG GAGTTGGCGT CGGCGGCGAC ACAACTGGTG
GCCGATTCGG GCGGTTCGGT CGACGAAGAA GCCGTTCGTC GCTACCACCG GGGGCGTGCG
GACGTGACCG GCTTCCAGGT CGCGGAGAAG GCCGTGGCCG GTGATCGCGC CGCTGCGCTC
GAATCACTGC GGTGGGCGCA GCAGATCGGG GTCGCCCACG TGTTGCTCGC CGATGCTTTG
GCCGACGCGG TGCGCACGAT CGCCAAAGTG TCGGCGGCCG GACGCGGTAA CCCCAACCAC
ATGGCGGGTG AGCTGGGGAT GCCGCCGTGG AAGATCCGCA AGGCGCAAAG TCAGGCCCGG
GGGTGGAGCT CCAGTGGGCT CGCCGAGGCC ATGCGGGTCG TCGCCCGAGT GAACGCCGAG
GTCAAGGGGG CGGCGGCGAA TCCGGAGTAC GCGCTCGAAC GTGCGGTGCT CGACATCGTC
GAAGCCCGTG ACCGGCGTTG A
 
Protein sequence
MTGPATTPPP LYLVLGEEEL LVERAVREAV DTARLADPTA EATRVRVSEL TPAQFAELVS 
PSLFSEGRVV VLDAAQEISQ ENADAVLSYV SAPADGITLV VVHSGGGRSK AAKSLPSALR
KAGAVVTECP KVTKPAEREA FVRNEVRRAG GRIDAPAVAA LIDAVGTDLR ELASAATQLV
ADSGGSVDEE AVRRYHRGRA DVTGFQVAEK AVAGDRAAAL ESLRWAQQIG VAHVLLADAL
ADAVRTIAKV SAAGRGNPNH MAGELGMPPW KIRKAQSQAR GWSSSGLAEA MRVVARVNAE
VKGAAANPEY ALERAVLDIV EARDRR