Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_12630 |
Symbol | |
ID | 8386599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1305587 |
End bp | 1306567 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644975348 |
Product | hypothetical protein |
Protein accession | YP_003133138 |
Protein GI | 257055306 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.793346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGGTC CAGCCACCAC ACCGCCCCCG CTGTATCTCG TGCTCGGCGA AGAAGAACTG CTCGTCGAAC GGGCCGTACG TGAGGCGGTC GACACCGCAC GTCTGGCCGA TCCGACGGCG GAAGCCACCC GGGTGCGTGT GAGTGAACTC ACCCCGGCGC AATTCGCGGA GTTGGTCAGT CCGTCACTTT TCAGCGAAGG CCGCGTCGTC GTGCTCGACG CGGCGCAGGA GATCTCCCAA GAGAACGCCG ATGCCGTGCT GTCCTACGTC TCCGCCCCGG CTGACGGCAT CACGCTCGTG GTCGTGCACA GCGGGGGAGG GCGGAGCAAA GCCGCGAAAT CGTTGCCTTC GGCGCTACGC AAAGCCGGTG CGGTCGTCAC GGAATGTCCG AAGGTCACCA AACCCGCCGA ACGGGAGGCG TTCGTCCGCA ACGAGGTACG TAGAGCGGGC GGACGGATCG ATGCGCCGGC CGTGGCGGCC CTCATCGACG CGGTGGGTAC CGATCTACGG GAGTTGGCGT CGGCGGCGAC ACAACTGGTG GCCGATTCGG GCGGTTCGGT CGACGAAGAA GCCGTTCGTC GCTACCACCG GGGGCGTGCG GACGTGACCG GCTTCCAGGT CGCGGAGAAG GCCGTGGCCG GTGATCGCGC CGCTGCGCTC GAATCACTGC GGTGGGCGCA GCAGATCGGG GTCGCCCACG TGTTGCTCGC CGATGCTTTG GCCGACGCGG TGCGCACGAT CGCCAAAGTG TCGGCGGCCG GACGCGGTAA CCCCAACCAC ATGGCGGGTG AGCTGGGGAT GCCGCCGTGG AAGATCCGCA AGGCGCAAAG TCAGGCCCGG GGGTGGAGCT CCAGTGGGCT CGCCGAGGCC ATGCGGGTCG TCGCCCGAGT GAACGCCGAG GTCAAGGGGG CGGCGGCGAA TCCGGAGTAC GCGCTCGAAC GTGCGGTGCT CGACATCGTC GAAGCCCGTG ACCGGCGTTG A
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Protein sequence | MTGPATTPPP LYLVLGEEEL LVERAVREAV DTARLADPTA EATRVRVSEL TPAQFAELVS PSLFSEGRVV VLDAAQEISQ ENADAVLSYV SAPADGITLV VVHSGGGRSK AAKSLPSALR KAGAVVTECP KVTKPAEREA FVRNEVRRAG GRIDAPAVAA LIDAVGTDLR ELASAATQLV ADSGGSVDEE AVRRYHRGRA DVTGFQVAEK AVAGDRAAAL ESLRWAQQIG VAHVLLADAL ADAVRTIAKV SAAGRGNPNH MAGELGMPPW KIRKAQSQAR GWSSSGLAEA MRVVARVNAE VKGAAANPEY ALERAVLDIV EARDRR
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