| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12600 |
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| Symbol | |
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| ID | 8386597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1301651 |
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| End bp | 1304164 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975346 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_003133136 |
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| Protein GI | 257055304 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGATCA AAGTCGCTGC GGTCGGCGCT CGCGGCGACG CACCGACGCA CGACTGGCGC
TTGGTTCCGG CCGCGGTCAC GGTGTGGTCG GGGGCGATCC TCGGATTGCT GTGGGGGTGG
TGGGCGAGCG CGTTGTGCGG GGCCGTCGGG TGCTCGGTCG CGGTCGTGTT GGCGTGGCGG
GTTTCGCGTT CAGGCCGTCA CGATCACCGC CGTTGGCTTC CCGCAGCGGG CGTGCTCTTC
CTCTGTGGAC TGTTGACCGC ATGGCCTGTG GGGGTCCGGT TGTACGACGC GGAGCACGCG
GAACTCCGTG GTCTCGCCCG CGCTGGTGAG AAGGTGACGC TGTCAGCGGT GGTGGTTCAG
CGGCCGCGCC CGGTCCATGT CGATGGTTAC GCGGGCCGTC CGGGAGGTGC CCGATCGGTA
CTCGTCCCGG TGGATGCCGT CACGGTGACG GTGGGGGGTG AACGTGTCGC CGCGCAGCAT
CGGGTCTTGC TCATCGCGCC GGCGGTTACC TGGAGCGATG TACTGGTGGG GCAGCATGTC
ACGGTGCGCG CCGAGCTTGC GCCCGCCCGA CCGCACGAGA TGACGGTGGC GGTCGGCTTC
GTGCGCGGAC CGCCCGAGAC GGAGCGCGTC GCACCGTGGT GGCAACGGAT TTCCGAGTCG
GTGCGCGCGG CGTTGCGTGC GGCCTGCGAG GTGCTGTCGG AGGAACCGGC GGGCTTGCTC
CCCGGGCTGG TGGTGGGGGA CACCAGTGAG CTCTCGAAAC GGGTGGAACA GGAGTTCCTC
GATGCGGGGC TGTCTCATCT GACCGCCGTT TCAGGGTCCA ATGTGGCCAT CCTGTGCGGT
GCGATCCTCC TTATGGCCCG AGGATTGCGA TGCGGTCCTC GTTCGTCGGC GGTGTCGGCG
GCCGCGGCCC TGCTCGGATT CGTCGTTCTC GTGGGCTACG AGCCGAGCGT GTTACGGGCA
GGCGTGATGG GTGCGGTGGG GTTGCTCGCA CTCGTGTTGG GACGGCGGGG CTCGGCGTTG
CCCGCCCTCG CGGCCGCGGT GTGCGTACTC GGGCTGTACG ACCCCGACAT GGCCGTCAGT
ATGGGCTTCA CGTTGTCGGT CGTAGCGACG GCAGGGCTCG TTCTACTCGC TCCGCTCTGG
TCACGGGCAT TGGAGCGTCG GGGAGTACCC GGCGGGATCG CGGACGCGCT GGCCGTGCCC
ACGGTGGCGT TCTTCGCGAC GGCCCCGGTC ATAGCGGGGA TGGTCGGGGA GGTGAGCGTG
GTCTCCATCG TCGCGAACCT CGCGGCCGCA CCCGTCGTCG CACCGATCAC CGTTCTCGGA
ACGGCCGCCG CTGCTCTAGC CCCGCTCTGG CCCGGTGCGG CCGAAATCGT GGTCCAGGTG
GTAGGGCCCG CGGTCAGCTG GCTGATCCTC GTGGCACGCC ACGCCGCTTC CGTGCCCGGT
GCGGTGATCC CGTGGCCGTC GGGGTGGTGG GGTGGTGTGT CCGCGGTGTT CGTGATCGTG
CTGCTGTGGT GCGGTCTCCG GTTCCGTGGG GTCCGGCTGG CGGTGACGCT CGCGGTGATC
GGCACAACGC TGTTCCTGGT GCCGACCCGT GTGCTCGCGC CCGTGTGGCC ACCGAACGGC
TGGGTGTTGG TGGCATGTGA CGTCGGCCAA GGTGATGGCC TTGTCCTGGC CACAGGGGAA
CGGGACCGGG CTGTCGTCGT CGACACCGGT CCGGATCCTG CTGCCTTCGA TCGCTGTCTG
GACCGGCTCG GCGTGAATCG AATCCCGTTG GTGGTACTGA CCCATCTGCA CGCGGACCAT
GTGGGAGGCC TGTCCGCGGT CTTCGACGGA CGCGCTGTCG GCGGGGTGGC CGTGGGACCG
GGGCTGACAC CGGAGTGGGC GTGGCGGTCG GTCGTGGACC TCACGGCCGA CCGACGAATC
CCGCTGGTCC GGCTGACCGC GGGAGACCGG CTCGTCTGGC GGGACCTGAG GATCGACGTG
CTCGCCCCCT CGGTAGGGAA TGCCGTGGTT GGTGGGGACA CCGACGGCAC CGCGATCAAC
AACACGTCAC TGGTCCTGCG GGCCACCACG CCGGCAGGGC GCATCTTGCT GACCGGCGAC
GTGGAATTGT CGGCTCAGGC GGAACTCCTC GCCATGGGAA CAGACCTCCG TGCCGACGTC
CTCAAGGTCC CGCATCACGG CAGTCGATAC ACGCTCGCGG CATTCCTGAA AGCCGTGTCA
CCGCGTATCG CGATCACCAG TGTCGGGGCT GACAACACCT ATGGTCATCC CAGCCCTCAG
ACCCATCGGG TGCTCCACGG GTTGGGGACC CTGGTGGTCA GAACCGACAC GAGCGGTGAT
ACGGCCGTGG TGTTGCACGA CGATGAACCG GCGGTCGTCC GAAGGGGACC ATCGATGCGG
CGTCGGCTCA GTCGTCCAGC GCGGCTTGCA CGGCCTCCAC CGATGGTGGG ACTGTGGCCT
TGGGGCCGAC TTGATCGCCG AGAGCGTCGA GTGTCTTCAA ACCGTCACCG GTGA
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| Protein sequence | MVIKVAAVGA RGDAPTHDWR LVPAAVTVWS GAILGLLWGW WASALCGAVG CSVAVVLAWR
VSRSGRHDHR RWLPAAGVLF LCGLLTAWPV GVRLYDAEHA ELRGLARAGE KVTLSAVVVQ
RPRPVHVDGY AGRPGGARSV LVPVDAVTVT VGGERVAAQH RVLLIAPAVT WSDVLVGQHV
TVRAELAPAR PHEMTVAVGF VRGPPETERV APWWQRISES VRAALRAACE VLSEEPAGLL
PGLVVGDTSE LSKRVEQEFL DAGLSHLTAV SGSNVAILCG AILLMARGLR CGPRSSAVSA
AAALLGFVVL VGYEPSVLRA GVMGAVGLLA LVLGRRGSAL PALAAAVCVL GLYDPDMAVS
MGFTLSVVAT AGLVLLAPLW SRALERRGVP GGIADALAVP TVAFFATAPV IAGMVGEVSV
VSIVANLAAA PVVAPITVLG TAAAALAPLW PGAAEIVVQV VGPAVSWLIL VARHAASVPG
AVIPWPSGWW GGVSAVFVIV LLWCGLRFRG VRLAVTLAVI GTTLFLVPTR VLAPVWPPNG
WVLVACDVGQ GDGLVLATGE RDRAVVVDTG PDPAAFDRCL DRLGVNRIPL VVLTHLHADH
VGGLSAVFDG RAVGGVAVGP GLTPEWAWRS VVDLTADRRI PLVRLTAGDR LVWRDLRIDV
LAPSVGNAVV GGDTDGTAIN NTSLVLRATT PAGRILLTGD VELSAQAELL AMGTDLRADV
LKVPHHGSRY TLAAFLKAVS PRIAITSVGA DNTYGHPSPQ THRVLHGLGT LVVRTDTSGD
TAVVLHDDEP AVVRRGPSMR RRLSRPARLA RPPPMVGLWP WGRLDRRERR VSSNRHR
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