| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12590 |
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| Symbol | |
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| ID | 8386596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1300580 |
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| End bp | 1301638 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975345 |
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| Product | DNA uptake protein |
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| Protein accession | YP_003133135 |
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| Protein GI | 257055303 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGAGT TGTCCACACT CCCCGGGTTG TCCACAGCGG CCACGGAATC GACTCACGGT
GACGGGCGGG ATCGCCGTAG CGTCGAATCC GTGTTCGAGA CAGCACGGAC GACGGTGCGG
CTCTCCGGCC GAACGCAGGA CACCGACCTC ATCGCAGAAA CCGGTGGGGT CAAGACCGGT
CAGGCCGAGA CTGCGCGAAA TGGGCCGGAG GAGACAGCGC CGGATTGTGT TTGGACCGCG
GACGCAAAGC GGGAAGCACG TCCGAAGGTC CGGTTGGCGC AGCTCGCCGC CGAGGTCGGT
GGTCGCCGGA CGTCACCCTC ACCCCGGCAC CGGGTGCAGG CACGTTCCGG GCGACGAGGT
GGCTTGATCG AACGGTGGCT TCCCGGAGGG CAGCGTGTCA CACCACCACG GCGACGGCAT
CTCGTGATCG CCGCTGTCGT CGGCGGTGTT CTGGTGAGTG TCGTCGCTGT GGCGGCGATC
GTCGGGAGCG GGCCGGAACC GGAGCACGCA CCGCCGCTAC CGCTGGTCCA ACAGGAGTCG
GTGTCGGCGG GGAAGGCCGG TGAGCCCGAT GCCGTCCCCG ATGTGGCGTC GAAAGCGACA
TCGACCGCTG CCGAACCCAC CTCACTCGTC GTCAGCGTGG TAGGCACCGT GGCGAGACCC
GGGCTGATCA CCGTGCGGCC CGGCGCTCGG GTCGCCGATG TCATCGAGTT GGCAGGGGGA
GCCGACAGTG ACACCGATCT GCTGACGGTG AACCTGGCTC GCCGGGTGTC GGACGGTGAG
CAGATCTACG TCGGTGTCAC CCCGCCGCCG GGAGCGGAGC ATCCTCCCGT CGCGGCGGTG
CCCGCCGATC CGTCCACATC GGCGGCGAAG GTGGATCTGA ACACGGCGGA TCGGCAGTTG
CTGCAGACTC TGCCCGGGGT GGGTGAGGCC ACGGCGTCCC GCATTCTCGA GTGGCGGGAA
CGCCATGGGA GGTTCACGTC GGTGAGCCAG CTTCGGGAAG TCGACGGCAT CGGTGAGAAA
CGGTTCGCGC GTCTGCGTGA TCTGGTGTCG GTCGGATGA
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| Protein sequence | MGELSTLPGL STAATESTHG DGRDRRSVES VFETARTTVR LSGRTQDTDL IAETGGVKTG
QAETARNGPE ETAPDCVWTA DAKREARPKV RLAQLAAEVG GRRTSPSPRH RVQARSGRRG
GLIERWLPGG QRVTPPRRRH LVIAAVVGGV LVSVVAVAAI VGSGPEPEHA PPLPLVQQES
VSAGKAGEPD AVPDVASKAT STAAEPTSLV VSVVGTVARP GLITVRPGAR VADVIELAGG
ADSDTDLLTV NLARRVSDGE QIYVGVTPPP GAEHPPVAAV PADPSTSAAK VDLNTADRQL
LQTLPGVGEA TASRILEWRE RHGRFTSVSQ LREVDGIGEK RFARLRDLVS VG
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