Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_12520 |
Symbol | obgE |
ID | 8386589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1294449 |
End bp | 1295930 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975338 |
Product | GTPase ObgE |
Protein accession | YP_003133128 |
Protein GI | 257055296 |
COG category | [R] General function prediction only |
COG ID | [COG0536] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR02729] Obg family GTPase CgtA [TIGR03595] Obg family GTPase CgtA, C-terminal extension |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.337649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCCC GGTTCGTGGA TCGCGTGGTG ATTCATCTCG CCGCGGGTAA CGGAGGGAAC GGCTGCGCCT CGGTGCATCG CGAGAAGTTC AAACCGCTCG GTGGTCCCGA CGGTGGCAAC GGCGGCCACG GCGGCGATGT GGTGCTCGTC GTCGACCCGG GTGTGCACAC CCTGTTGGAC TTCCATTTCC GTCCCCATGC GCGAGCCGGA AACGGTAAGC AGGGGCAGGG TGGGCACCGT AACGGTGCGG CCGGGGAGGA CCTGGAGTTG CGCGTGCCCG ACGGCACCGT CGTGCTCACC GAGGACGGTG AGGTGCTGGC CGACCTGGTG GGCGCCGGCA CCCGCTTCGT GGCGGCCAAG GGAGGCCGTG GCGGGCTCGG TAACGCCGCA CTCGCGTCGC GGGCGCGTAA GGCACCCGGT TTCGCGCTGC TGGGAGAGCC GGGGGAGGAA CGCAACCTCG TGCTGGAGTT GCGTTCCGTC GCCGACGTGG GACTGCTCGG CTTCCCCTCG GCGGGCAAGT CGTCGCTGAT CTCGGTGTTG TCGGCCGCCA AGCCGAAGAT CGCCGACTAC CCGTTCACGA CGTTGGTGCC CAACCTCGGG GTGGTGAGCG CGGGGGACAC CGTGTTCACC ATGGCCGACG TTCCCGGTCT CATTCCGGGG GCGAGCCAGG GACGTGGCCT GGGCCTGGAC TTCCTGCGTC ACATCGAACG CTGCGCCGTG TTGGTGCACG TGATCGATTG CGCGACGTAC GAGCCTGAGC GGGATCCGAT CTCGGACTTC GACGCGTTGG AGAACGAGCT CGCGCAGTAC ACGCCCGTGC TCGGTGGGGA CCTCGACTCG CGGCCGAGGG TCGTGGTCCT CAACAAGGTC GACGTGCCTG ATGCGGCCGA GCTGGCCGAG ATGGTGAGGC CCGACTTCGA GGCACGCGGA CTGCGCGTGT TCGAGGTGTC CACCGCGACG CACGCCGGGC TGCGGGAGTT GACCTACGCG CTCGGCCAGA TCGTGGAGGA GCACCGTGCC GCGCAACCGC CGCCCGCGCC GACGAAGGTC GTCGTGACAC CGAAGGCCGT GGACGACGGT GGTTTCACCG TGGAGCCGGA CCCCGAGGAA CCCGGTGGTT TCATCGTGCG CGGCGCCAAA CCCGAACGGT GGGTGCGGCA GACGAACTTC GCCAACGATG AAGCCGTCGG CTATCTCGCC GAACGGCTCT ACCGGCTCGG TGTGGAAAAG GAGCTCGCAC GGATGGGTGC CGAACCCGGC TGTGCGGTCA CCATCGACGG CGTGACCTTC GATTGGGAGC CTTCCACTCC GGGTGTGGTG GAGGCACTGA CCGGCCGTGG CAGTGATCCA CGGCTGGAGG ACCGGAGCAG GACGACCGCG GCGGAGCGCA AGGAGGCTCG CCGCCTGCGC AGGGAGGGCA CAGGGCCCGA CCTGGACACC CCCAACGACG AGGAAAGCGG GACCGAGGAC GCCGATGAGT GA
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Protein sequence | MASRFVDRVV IHLAAGNGGN GCASVHREKF KPLGGPDGGN GGHGGDVVLV VDPGVHTLLD FHFRPHARAG NGKQGQGGHR NGAAGEDLEL RVPDGTVVLT EDGEVLADLV GAGTRFVAAK GGRGGLGNAA LASRARKAPG FALLGEPGEE RNLVLELRSV ADVGLLGFPS AGKSSLISVL SAAKPKIADY PFTTLVPNLG VVSAGDTVFT MADVPGLIPG ASQGRGLGLD FLRHIERCAV LVHVIDCATY EPERDPISDF DALENELAQY TPVLGGDLDS RPRVVVLNKV DVPDAAELAE MVRPDFEARG LRVFEVSTAT HAGLRELTYA LGQIVEEHRA AQPPPAPTKV VVTPKAVDDG GFTVEPDPEE PGGFIVRGAK PERWVRQTNF ANDEAVGYLA ERLYRLGVEK ELARMGAEPG CAVTIDGVTF DWEPSTPGVV EALTGRGSDP RLEDRSRTTA AERKEARRLR REGTGPDLDT PNDEESGTED ADE
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