| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12490 |
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| Symbol | |
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| ID | 8386586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1290314 |
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| End bp | 1293595 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644975335 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_003133125 |
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| Protein GI | 257055293 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACG CGGAGACACC CGCCGAAAAC ACTGGCGGGA CTGCCGCCAC ACCTATTGCA
CGCGCGCTGG CCGAGCTGCC GGACAAGACG AGGGTCCACC TGCTGGCGAA GCTGTTGGGT
ACCAGCAGTC GCGAAGTGTT GGCCGCGTTG GCGCAGCTCG GACACACCGC TCGCAGCCCA
CAGTCGGGTG TGTCGAAGGA TGTCGCGCTG CGTGTGGCGG AGGAGCTCGG CTTCGTGGAG
ACCGAGCCAC CCGATGGTCA GGAACAGTCG GACACCGACG CGACACAGAC CGATATCACC
CAGACGGTGG AGCCGGCCGA GGCGCCCGCG GCCGATGCGG GTGACGAACC AGCCGCCGAT
CCGGCCGCCG CACCGAATGC CACCGAGGAA CCCGTGGCGG AGGGGGCGGC CACGGAGGAG
CCGGAAAAAG ACCCCGAAAA GGACCCCGAA AAGGACGTGG TCGCGGACTC GGCGGAGTCG
AAGAAGGACG AAGAGACCGC GGAGGAGGAC CCGAGGGGCG TTCGGTCGGA GTCCTCCGAG
CAGGCCGGGG CGACCGAGTC GCCCCAGGGT GCGCCCGTGG TGGAGCCGGC CGAGACCGGC
GGAACGCCGT CGGCCACGAC ACCGACCGGC ATGGCTCCGC CGGTCACCGC GCCGGTGCTG
ATCCCACCGG TCCCGCCGGT GCAGTCGACG CAACCCGAGC CGCGACCCGA GATCCCACAC
ACACCGGTGT TCGCGGCACC GTCGCCTCTT TTCCTGCCAC CCGAGCCGAT CGCCTCTCCT
CCGGCGGCAG CCAAGGGCGA GGCGGGCACG GATGCTTCCG GTTCCGGAAG CGACTCCAGG
CAGACCCACG ACCATTCGGG TGACGGGGGG AGTTCGGACG GTACCCGTCG TCGTCGCCGT
CGGGGCCGCC GTGGTCGCGG CCGGGGCAAG GGCGGCGAGG ACCACACCAC AACCTCTTCG
ACGTCGACCG CCACGACCAC CGACACCGCC GCCTCGACGG CCACGGAAGC TGCCGACTCC
ACCGGGACCG CCGAAGGGGA GCAGCAGGCG AAGCCGGGCG CCGAGAACAC CGACGAGTCT
TCGACTTCCG TCGCGAGTGA CACCGACGGC AACGTCGGAG GCGGGGGAGA GTCGTCCACG
CAGCAGGAGG AGGGCGACAC CGAGCGGGGT GCCGCCCAGT CGTCGGAGAC CGAGACCACG
ACGACCAGGC GTCGCCGCCG CCGGCGCCGC CGCAGGAGCG GTGACGACGA CACCCTCGAG
ACCACGACGT CGGCGGACGA CCCTCCCAAC ACGGTCGTCC ACGTGCGGGA CGGCAAGCCC
GCCGAGGAGA AGGAGACGAA GGCCGAGGAC GGTGTGCGCA GCGTGCGCGG CTCCACCCGT
CTGGAGGCCA AGCGTCAGCG TCGCCGGGAC GGCCGGGAAG CGGGCAGGCG GCGTGCCCCG
ATCCTGTCGG AGGCCGAGTT CCTCGCCCGC AGGGAGTCGG TCGAGCGGAC CATGGTGGTC
GCCGAGCGTG GCGATTCGAC TCAGATCGGT GTGCTCGAGG ACGGTGTGCT CGTCGAGCAT
TTCGTCACCT CGTCGGACAG CGGCTCGATC GTCGGCAACG TCTATCTCGG CCGGGTGCAG
AACGTCCTCC CGTCGATGGA AGCGGCTTTC ATCGACATCG GCCGCGGCCG CAACGCGGTG
CTCTACGCCG GTGAGGTGGA TTGGGACGCC GCCGGGTTGG AGGGCAAGGC CCGCAAGATC
GAGCAGGCGT TGACCACCGG TGACCACGTG CTCGTGCAGG TCACCAAGGA CCCCGTCGGG
CACAAGGGGG CCCGGCTGAC CACACAGATC TCCCTGCCCG GCAGGTTCCT CGTCTACGTG
CCGTCGGGCG GAGCCACCGG CATCTCACGC AAGCTTCCGG AGAACGAGCG ACGTAGGCTC
AAGGACATCC TCAAGCGCAT CGTGCCGTCC GACGCGGGCG TCATCATCCG CACGGCCTCG
GAGGGCATCA GCGAGGAGGA GCTCGCGCGC GACGTCCGCA GGCTCAAGGC CCAGTGGGAG
GTCATCAAGG AGAAGGCGGA GGCCGCGAGC GCGAAGAAGT CCGGTGCACC CGCGCTGCTG
TACCAGGAGC CGGACCTGCT GGTGAAGGTC ATCCGGGACC TGTTCACCGA GGACTTCAAG
AAGCTCGTGG TTCAGGGCGA CACCGCCTGG GAGACCATTC GGAACTACGT CGAGCACGTC
GCTCCGGATC TGCTCGATCG CGTCGAGCGC TATGTCGGCA CGGGGGATGT GTTCGCCGAC
TACCGCATCG ACGAGCAGCT CATGAAGGCG CTCGACCGCA AGGTGTGGTT GCCTTCAGGC
GGTTACCTGG TGATCGACCG CACCGAGGCC ATGACGGTGA TCGACGTCAA CACCGGCAAG
TTCACCGGGT CCGGTGGCAA CCTGGAGGAG ACGGTCACCA GGAACAACCT GGAGTCGGCC
GAGGAGATCG TGCGGCAGCT GCGGCTGCGG GACATCGGCG GCATCATCGT CATCGACTTC
ATCGACATGG TGTTGGAGTC GAACCGCGAG TTGGTGCTGC GCAGGCTCAC CGAGTGCCTC
AGCCGGGACC GCACCCGACA CCAGGTCGCC GAGGTCACGT CGTTGGGTCT GGTGCAGATG
ACCCGGAAGC GCGTCGGCAC GGGGCTGCTG GAGGCGTTCT CCACCACGTG TGAGCACTGC
AAGGGCCGGG GCGTCATCGT GTCCACCGAC CCGCACCGGG GGAATGGGCA CGGTAACGGC
CACCACGGTT CGCGGCGTTC CCGGAACAAG TCGAAGGCCG GAGAACAGCA CGGGACGAAG
GCGGTGGAGC AGGCCGCACA GGGACCGACA CCGGAACAGC GGGAGTCGGC CGTGTCGGCC
GTGCAGGCCA TGGCCAACGC CTCGAAGGTG GCTCTGACGA AGACCTCGGA GAGCGAGTCG
GACGCTGAGC GTGCCGATCG GTCGGGTGAG GACACGCGGA CGACCGTGGA GGCCCAGCCC
GACGAGTCCG CTGCGGTGGA CGGGCAGCGC AACGGCGCGG TCCCGGTGCG ACCGGAGGAA
GAGGCCGCTT CCACTCTGTC CTCGGTGGCC AAGACCTCCA CGTCGGCCGA GGAGTCCGCT
GAGGATCGGC CCGAGAGTAC GGCGGACGGG CAGCGGGAGC AGCGCCCGAC GACGACGGCG
GCGGCGGCCG TGTCCGAGCC CGCTGTGCGT ACGGTGAGGC GTCCCCGTCG AGCGGCGGTG
CGGCCGGCGG GGCCGCCCGT GCCCGCCCGG GACGACGGCT GA
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| Protein sequence | MSNAETPAEN TGGTAATPIA RALAELPDKT RVHLLAKLLG TSSREVLAAL AQLGHTARSP
QSGVSKDVAL RVAEELGFVE TEPPDGQEQS DTDATQTDIT QTVEPAEAPA ADAGDEPAAD
PAAAPNATEE PVAEGAATEE PEKDPEKDPE KDVVADSAES KKDEETAEED PRGVRSESSE
QAGATESPQG APVVEPAETG GTPSATTPTG MAPPVTAPVL IPPVPPVQST QPEPRPEIPH
TPVFAAPSPL FLPPEPIASP PAAAKGEAGT DASGSGSDSR QTHDHSGDGG SSDGTRRRRR
RGRRGRGRGK GGEDHTTTSS TSTATTTDTA ASTATEAADS TGTAEGEQQA KPGAENTDES
STSVASDTDG NVGGGGESST QQEEGDTERG AAQSSETETT TTRRRRRRRR RRSGDDDTLE
TTTSADDPPN TVVHVRDGKP AEEKETKAED GVRSVRGSTR LEAKRQRRRD GREAGRRRAP
ILSEAEFLAR RESVERTMVV AERGDSTQIG VLEDGVLVEH FVTSSDSGSI VGNVYLGRVQ
NVLPSMEAAF IDIGRGRNAV LYAGEVDWDA AGLEGKARKI EQALTTGDHV LVQVTKDPVG
HKGARLTTQI SLPGRFLVYV PSGGATGISR KLPENERRRL KDILKRIVPS DAGVIIRTAS
EGISEEELAR DVRRLKAQWE VIKEKAEAAS AKKSGAPALL YQEPDLLVKV IRDLFTEDFK
KLVVQGDTAW ETIRNYVEHV APDLLDRVER YVGTGDVFAD YRIDEQLMKA LDRKVWLPSG
GYLVIDRTEA MTVIDVNTGK FTGSGGNLEE TVTRNNLESA EEIVRQLRLR DIGGIIVIDF
IDMVLESNRE LVLRRLTECL SRDRTRHQVA EVTSLGLVQM TRKRVGTGLL EAFSTTCEHC
KGRGVIVSTD PHRGNGHGNG HHGSRRSRNK SKAGEQHGTK AVEQAAQGPT PEQRESAVSA
VQAMANASKV ALTKTSESES DAERADRSGE DTRTTVEAQP DESAAVDGQR NGAVPVRPEE
EAASTLSSVA KTSTSAEESA EDRPESTADG QREQRPTTTA AAAVSEPAVR TVRRPRRAAV
RPAGPPVPAR DDG
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