Gene Svir_12410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12410 
Symbol 
ID8386578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1280804 
End bp1281214 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content69% 
IMG OID644975327 
Productnucleoside diphosphate kinase 
Protein accessionYP_003133117 
Protein GI257055285 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.26878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAGC GCACGCTGGT CCTGGTCAAG CCCGACGGTG TCAAGCGCGG CCTCGTCGGC 
GAGGTCATCT CCCGGATCGA GCGCAAGGGG CTGCGGCTGG CCGCCATGGA CCTGCGCATG
GTCGAGCGTT CGGTGGCCGA GGAACACTAC GCCGAGCACA AGGACAAGCC GTTCTACGGT
GACCTGCTCG ACTTCATCAC CTCGGGGCCG GTCGTGGCCA TCGCGGTGGA GGGGCCCCGT
GCCGTGACCG CGTTCCGGCA GCTGGCGGGC GGCACCGACC CCGTGGAGAA GGCCACGCCG
GGCACCATCC GCGGCGACTT CGCCCTGGAG ACGCAGTACA ACCTCGTGCA CGGCTCCGAC
TCGCCCGAAT CGGCCGAGCG TGAGCTGAAG CTGTGGTTCC CCGACCTGTG A
 
Protein sequence
MSERTLVLVK PDGVKRGLVG EVISRIERKG LRLAAMDLRM VERSVAEEHY AEHKDKPFYG 
DLLDFITSGP VVAIAVEGPR AVTAFRQLAG GTDPVEKATP GTIRGDFALE TQYNLVHGSD
SPESAERELK LWFPDL