| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12340 |
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| Symbol | |
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| ID | 8386571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1271955 |
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| End bp | 1275557 |
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| Gene Length | 3603 bp |
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| Protein Length | 1200 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975320 |
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| Product | glucose/sorbosone dehydrogenase |
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| Protein accession | YP_003133110 |
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| Protein GI | 257055278 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.217847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGAC GCAAGAGACT GTTGTCGCGC CTCGGCGCCA TCGCGTTGGG CGGATTACTC
ACCGCCGGAA CGGTTCCGGC GATCGCGCAG GCACAGGAAG CCGAGTTCCA CGCACTGCTG
TTCACCAAGA CCGAAGGATA CCGGCACGAT TCGATCCCGG CCGGGATCGA GATGTTCGAG
AACCTGGCCG CCGAGAACAA CTTCACGTTC GACCACACCG AGGACTCCAG CGTCTTCAAC
GACGACGACC TCGCCGCCTA CGACGTCGTC ATCATGTTCC AGACCTCCGG GATGGTCTGG
GAGAACGACG CGCAACGCGA GGCGATACAG AACTACGTGG AAAACGGTGG TGGTATCGCC
GCGATCCACA ACGCCACCGA CATGGGAATC GAGAACGAGT TCCCGTGGTG GGACGAGCTC
GTGAACGCGG GTGCGCACAT GCCGTCGCAC TCGCCGGGCG TCCTGGAGGG CACGGCGAAG
GTCACCGACC GCCACCACCC GTCCACGGAA GGACTTCCGG CACGGTGGGA ACGTGCCGAG
GAGTGGTACA ACTTCGACCG GAGCATGCGC GGCAAGGTGC ACGTGCTCGT GTCGGTCGAC
GAGTCCACCT ACGACCCCGG TCCTGACGCG ATGGGAGCCG ACCACCCCAT CTCCTGGTGT
CGCGACGTCG GCCTGTCCCG CGTGTGGGCC ACCGCCATGG GACACGACTC CGCCGCCTAC
AGCGAGGAGG CGTTCGTCCA GCACATCCTC GGCGGGGTGC GTACGGCGGC CAGGGTGGTC
GAGGCGGATT GTTCGGCCAC AGTGGACGCC GCGTTCGAGA AGGTCGCGCT CGATGTCAAC
ACCCAGGCGC CGACGGCCAT GGACGTCGCC CCGGACGGCC GGGTGTTCTA CACGGAGATC
CTCGGTCGGG TGATGGTGTA CCACCCGGAG ACGGAGAGCA CGTTCACGGC GCTGGAGATC
CCGGTCTACT CCGGTGGTGA GGACGGCCTG GTCGGGTTGG TCCTCGACCC GGATTTCTCC
GACAACGGGT GGATCTACCT GTACTACTCC CCACCCGGGG ACGAGGAGAT CAACCGCGTG
TCCCGGTTCA CCGTCGAAGG CGACACGATC TCGCTCGACA GCGAGGTGCA GATCATCGAC
ATCCCCGCGT CGCGTCGCTC GGAGCCCGGC CACACGGGTG GATACCTCAC GTTCGGCCCG
GAGGGTGATC TGTACATCGG CGTCGGTGAC GACACCAACC CGTTCGAGTC GAACGGTTAC
ACCCCGATCG ACGAGCGGGA AGGCCGGGAC CTGTTCGACG CGCAGAAGAC GTCGGCCAAC
ACCAACGATC TGCGCGGCAA GATCCTGCGC ATCACCCCGC AGGCCGAGGG CGGGTACACG
ATCCCCGAGG GCAACATGTT CGCCCCGGGG GCGGAGAACA CGCGGCCCGA GATCTATGCG
ATGGGCTTCC GCAACCCGTA CCGGTTCACC GTCGACGTCG ACGGAACCCT CTATCTGGCC
GACTACGGTC CCGACGCCGG TGAGGCCGAC CCCGAGCGCG GCCCCGACGG CAAGGTCGAA
TGGAACATCG TCCGGAAGCC GGGCTTCTAC GGTTGGCCGT ACTGTATCGG CAACAACATC
CCGTACAACG ACTACGACTT CGCCACGGGC ACCTCGGGGG AGAAGTTCGA CTGCGAGAAC
CCCGTCAACG ACTCGCCGAA CAACACGGGG TTGACCGAGT TGCCGCCCGC CCAGCCCGCC
GACGTCTGGT ACGGCTACGG CGAGTCGGAG GAATTCCCGA TCCTGGGGAC CGGTGGTTCC
GCCCCCATGG GCGGTCCGGT GTACCGATAC GACCCCGAAC TCGAATCGGA GATCAAATTC
CCCGAGTACT ACGACGGCAA GGCGTTCTTC TACGAGTGGG CGCGAAACCG CATCTACACC
ATCACGTTCG ACGAGCAGGG CGAGGTACTC AACCTCGATC CCTGGTTGGT CAGTGAGCAG
ACGATGGCCC CGATGGACAT GCGGTTCGGT CCCGACGGTG CCATGTACCT GCTGGAGTGG
GGTGGAGGTT ACGGCCGGGA CAACCCGGAC TCGGGGCTCT ACCGCATCGA GTACAACCAG
GGCAACCGCA GGCCGATCGT CGAGGTGGGC GCCACCGTGA CGTCAGGTCA GGCGCCACTG
GAGGTGTCGT TCACCAGCGA GGGTTCCCAC GACCCCGAGG GCACGGACGT CACGTACTCG
TGGGACTTCG GGGACGGTGC AACGTCCACC GAGGCGAATC CGACGTACAC GTTCACCGAG
CACGGTCAGT ACAACGTGCA GCTCACGGTG ACCGATGCGA CGGGTAAGAC CGGCGTGGGC
AACGTCACCG TGACGGTGGG CAACACCGCT CCCACGGTGT CCGTGGCAGC GCCCGTCAAC
GGCGGATTCT TCGACTTCGG CGACCACGTG GCGTTCGAGG TCGACGTCAC CGATCCCGAG
GACGGGGAGA TCGACTGCGG CGAGGTGGTC GTGCAACCCG CGCTCGGTCA CGACGCGCAC
GCGCATCCCA TGGACCCGAT CAACGCCTGC GAAGGGGTTA TCGAGACCAT TGTGGACGAT
GGTCATGCGG GAGCGAACAT CTTCTACTCG ATCGACGCCA GCTACACCGA CCACGGCGGT
ATCGACGCGC CACGGTTGAT CGGTCGGGAC ACCGTGATCC TCCAGCCCAA GCACAAGCAG
GCCGAGTACT TCACGTCCTC GGAAGGCATC CGCATCGTGC ACGCGGAGGG TGCGGAGAAC
GGCAAGCGCA TCGGTGACAT CGACGACGGC GACTGGATCG CCTTCACCCC GGTGAACTTC
GCGGGTATCG ACGAGGTGTC GTTACGCGTG TCGGCTCCCG AGGGTGCCGG TGGCTCGGTG
GAGCTGCGGG CCGGTGCTGT GGACGGTCAG GTGGTGGCCA CCGTGGAGGT CCCGTCCACG
GGTGGGTGGG ACAACTACGA GGACCTGCCG CCGGTCCCGG TGACCGATCC GGGCGAGACG
ACGGAGTTGT TCGTGGTGTT CCGGGGTGAG ATCGCCAGTC CGTTCGACCT CGACTCGTTG
ACGTTCCTCG GGGACGGGGT GGCGCAGGTC GACGACGAGG CGCCGGAGAT CTCGGTGACC
GGCGTGGCGG ACGGGGCCTC CTACGGCGAC TCCACCGACC TCATCCTCGG CTGGGAGGCC
ACGGACTCCG GTTCGGGCAT CGCCTCGGTC GAGGCGGAGC TCGGCGGGAA GCCGATCGAG
AACGGCGCGG AGATCCCGCT GTACACAGTG GATCTGGGAG AGCAGGAGTT CGTGATCACG
GCCACCGACA GGGCGGGGAA CACGGCCGAG CGGAAAGTCA CCTTCACCGT GGTGACGTCG
CTCACCGATC TTCGGGCCCT GGTGGCGCGG TTCGCGGACG AGGACCGCAT CAGTGGGAAG
ACGGCCACCC GGCTGACGGT CCTGTTCTCC CTCGTGGAAG GCGTGAAACG GATCAGTCCT
CACGCTGCGG CATGGGTGCT GACGCTCGCC GTTTCCGACA TGGAGAAACG GATCTCGGAT
ACGGAGGCGA AGGATGTGCT GGTCCGGGAC GCCCGATCGC TGATCGACAG TTGGCGGACG
TGA
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| Protein sequence | MSRRKRLLSR LGAIALGGLL TAGTVPAIAQ AQEAEFHALL FTKTEGYRHD SIPAGIEMFE
NLAAENNFTF DHTEDSSVFN DDDLAAYDVV IMFQTSGMVW ENDAQREAIQ NYVENGGGIA
AIHNATDMGI ENEFPWWDEL VNAGAHMPSH SPGVLEGTAK VTDRHHPSTE GLPARWERAE
EWYNFDRSMR GKVHVLVSVD ESTYDPGPDA MGADHPISWC RDVGLSRVWA TAMGHDSAAY
SEEAFVQHIL GGVRTAARVV EADCSATVDA AFEKVALDVN TQAPTAMDVA PDGRVFYTEI
LGRVMVYHPE TESTFTALEI PVYSGGEDGL VGLVLDPDFS DNGWIYLYYS PPGDEEINRV
SRFTVEGDTI SLDSEVQIID IPASRRSEPG HTGGYLTFGP EGDLYIGVGD DTNPFESNGY
TPIDEREGRD LFDAQKTSAN TNDLRGKILR ITPQAEGGYT IPEGNMFAPG AENTRPEIYA
MGFRNPYRFT VDVDGTLYLA DYGPDAGEAD PERGPDGKVE WNIVRKPGFY GWPYCIGNNI
PYNDYDFATG TSGEKFDCEN PVNDSPNNTG LTELPPAQPA DVWYGYGESE EFPILGTGGS
APMGGPVYRY DPELESEIKF PEYYDGKAFF YEWARNRIYT ITFDEQGEVL NLDPWLVSEQ
TMAPMDMRFG PDGAMYLLEW GGGYGRDNPD SGLYRIEYNQ GNRRPIVEVG ATVTSGQAPL
EVSFTSEGSH DPEGTDVTYS WDFGDGATST EANPTYTFTE HGQYNVQLTV TDATGKTGVG
NVTVTVGNTA PTVSVAAPVN GGFFDFGDHV AFEVDVTDPE DGEIDCGEVV VQPALGHDAH
AHPMDPINAC EGVIETIVDD GHAGANIFYS IDASYTDHGG IDAPRLIGRD TVILQPKHKQ
AEYFTSSEGI RIVHAEGAEN GKRIGDIDDG DWIAFTPVNF AGIDEVSLRV SAPEGAGGSV
ELRAGAVDGQ VVATVEVPST GGWDNYEDLP PVPVTDPGET TELFVVFRGE IASPFDLDSL
TFLGDGVAQV DDEAPEISVT GVADGASYGD STDLILGWEA TDSGSGIASV EAELGGKPIE
NGAEIPLYTV DLGEQEFVIT ATDRAGNTAE RKVTFTVVTS LTDLRALVAR FADEDRISGK
TATRLTVLFS LVEGVKRISP HAAAWVLTLA VSDMEKRISD TEAKDVLVRD ARSLIDSWRT
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