| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12280 |
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| Symbol | |
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| ID | 8386565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1266200 |
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| End bp | 1267717 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975314 |
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| Product | monosaccharide ABC transporter ATP-binding protein |
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| Protein accession | YP_003133104 |
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| Protein GI | 257055272 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.171798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.428152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTGA CGCGCCTCAC TGCACAGGAG CCGATCGTCC GGATGCGGGG GATCACCAAG
CGGTTCCTGG GGAACACGGT CCTCCAGGGG GTGGACCTCG ACCTGTACGC CGGTGAGGTG
CACGCACTCG TGGGGGAGAA CGGTGCGGGC AAGTCGACGT TGATGAGGAT CCTGGCCGGA
GTCCACACCG CCGACGAGGG GCGCGTGGAA CTCGACGGGC GTCCGGTGTC GTTCTCGGCG
CCCAGGCAGG CGCAGGCCGC GGGTATCTCC ATCGTGCATC AGGAGCTCAA CCTGCTCGGT
GATCGAACGG TGGCCGAGAA CGTGTTCCTC GGCTCGGAGC CCGTGCGCTA CGGCAGGGTC
GACCGGCGAC GCATGGAATC GGACACCGTG GCGTTGCTGG AGGAACTCGG CGTCGTGGGA
ATCTCCCCAC GAACCCTCGT GCGACGTTTG TCGGTCGCCC AGCGACAGGT CGTGGAGATC
GCCAAGGCGC TGTCGAGCGA CGTCCGGGTG CTGGCGATGG ACGAGCCCAC CGCCGCGTTG
GCCGACAACG AGGTGGAACT GCTGTACAGG CTCGTGCGGC GGTTGTGTGA TCACGGTATC
GCCGTGCTCT ACGTCTCCCA CCGCTTGGTG GAGGTGTTCG CGCTCAGTCA CCGCATCACC
GTGCTCAAGG ACGGCATGCT GGTCATCTCC CGACCGAGCG GGGGACTGAC CGGCGACGAA
CTCGTCCGGC ACATGGTGGG ACGTTCGTTC GAGGCGTTGT TCCCGCCCCG GGCGAAGGAT
TCGGAGCTCG GTGCGACGCG GTTACGGCTG TCCGGATGCG GTAACGAGAA ACTGCGCGAC
ATCGATCTGG AAGTACGCGC GGGCGAGATC GTCGGGCTGG CGGGTTTACA GGGCGCGGGC
CGCTCGGCCA TCGCCCGCGC TGTGGGCGGC AGCGAACCGT TCACCGTCGG AACGGTCGAA
GTGGACGGTG CGCCCGTGCG GTTGAGGTCG CCACGCGCGG CCGTGCGAGC CGGGATCGCG
TACGTCACCG AGGACCGCAA GGGGGAGGGG TTGGCCCTGC GCCAGTCGGT GCGGGACAAC
GCCTTGCTGG TGCGTCGTGC CGCTTTCGGT GGCCGATCCC GGGGTTGGTC GAGAGGGATC
TCGAAGCTGC TGGAAGCGAT GACCGTGGTC GCGCGTTCAC CGGATCAGGA GGTGCGGTTC
CTGTCCGGTG GGAACCAGCA GAAGGTCGTG CTCGCCAAGT GGTTGGCGGT GGAGCCCAAG
GTGCTCGTCG TCGACGAACC GACCCGGGGC GTCGACGTCG GTGCCAAGCA GGCGGTGTAC
GAGCTGTTGC GCGGGTTGGC CCGGTCCGGT GTGGCCATCG TGATGATCTC TTCCGAGTTA
CCCGAACTGA TCGGCATGAG TGACCGCGTG TTGGTGCTGC ACGACGGTCG GATCGCGGGT
GAGCTCCCCG CGGGGCCGAC GGAGGAAGCG GTGATGCGAC TGGCCACCGG CCATGTGACC
CCCAAGGAGG CCGCATGA
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| Protein sequence | MAVTRLTAQE PIVRMRGITK RFLGNTVLQG VDLDLYAGEV HALVGENGAG KSTLMRILAG
VHTADEGRVE LDGRPVSFSA PRQAQAAGIS IVHQELNLLG DRTVAENVFL GSEPVRYGRV
DRRRMESDTV ALLEELGVVG ISPRTLVRRL SVAQRQVVEI AKALSSDVRV LAMDEPTAAL
ADNEVELLYR LVRRLCDHGI AVLYVSHRLV EVFALSHRIT VLKDGMLVIS RPSGGLTGDE
LVRHMVGRSF EALFPPRAKD SELGATRLRL SGCGNEKLRD IDLEVRAGEI VGLAGLQGAG
RSAIARAVGG SEPFTVGTVE VDGAPVRLRS PRAAVRAGIA YVTEDRKGEG LALRQSVRDN
ALLVRRAAFG GRSRGWSRGI SKLLEAMTVV ARSPDQEVRF LSGGNQQKVV LAKWLAVEPK
VLVVDEPTRG VDVGAKQAVY ELLRGLARSG VAIVMISSEL PELIGMSDRV LVLHDGRIAG
ELPAGPTEEA VMRLATGHVT PKEAA
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