Gene Svir_12250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12250 
Symbol 
ID8386562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1261750 
End bp1262436 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID644975311 
Producthypothetical protein 
Protein accessionYP_003133101 
Protein GI257055269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATCG CTGAGGATCT GTTGCTGTTG GCGTACGCCG ACGAGGCCCG AGGCCCGGTG 
GGCGGTGTCT CCCAGCTGGA GCATGCGCTG GTCGGGGCGC TGTTGGTGGA ACTCGTCATC
CGGGAGCGCG TCGATGTCAC CACGGTAGGC GCTGAAGGTG AATCGGGCAG GGTCTCGGTG
CGGGACGACA CACCGACGAA AGTGGCGCCG CTCGACGACG CGCTCGCCCG GTTGTCCACG
CTGGAGGGAG CAAAGCCCAA GGACGTACTG CGTTCGTTGG CCGGAGCCGG GCTCGCCGAA
CGACTGCTCA CGGGCCTCGT CGAGCGTGGT CTCCTGCGCA AGGAGCACGG CCATGTTCTC
GGCTTGGCCC CCGCACCCTG TTGGCCCGCC GAGGACTCCC GGCACGAGGA GGGGGTCAAG
GACCAGTTGC GTCGCGTACT CGTGGACGGC GAGTACCCGG ACGAACGCAC CGCCGTTCTG
ATCGCGTTGC TGGCCCACGG CACGGCGCTG AGACACGTCG CGGGCCGCGA ACACGCCGAC
GTGGCCGATC GCCGGGCAAA GGAGATCGCA CAGGGCAGTT GGGCGGGTGA TTCCCTGCGG
AAGTCCGTTG AGGAGATCGT CACGGCGGCG CTTCTGGCCC CCACGATCCT GTTGGCCAGT
TCGCCCGCCT TCGTCCGTCG CTGGTGA
 
Protein sequence
MLIAEDLLLL AYADEARGPV GGVSQLEHAL VGALLVELVI RERVDVTTVG AEGESGRVSV 
RDDTPTKVAP LDDALARLST LEGAKPKDVL RSLAGAGLAE RLLTGLVERG LLRKEHGHVL
GLAPAPCWPA EDSRHEEGVK DQLRRVLVDG EYPDERTAVL IALLAHGTAL RHVAGREHAD
VADRRAKEIA QGSWAGDSLR KSVEEIVTAA LLAPTILLAS SPAFVRRW