| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12200 |
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| Symbol | |
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| ID | 8386557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1257165 |
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| End bp | 1258454 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644975306 |
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| Product | ATP-dependent Clp protease ATP-binding subunit ClpX |
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| Protein accession | YP_003133096 |
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| Protein GI | 257055264 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCA TCGGCGACGG GGGAGACCTG CTGAAGTGCT CTTTCTGCGG TAAGAGCCAG
AAACAGGTGA AAAAGCTCAT CGCCGGGCCC GGCGTGTACA TCTGTGACGA ATGCATCGAG
CTGTGCAACG AGATCATCGA GGAAGAGCTC GCCGAGACGA ACGACGTCAA ACTCGATGAG
TTGCCCAAAC CGGCCGACAT CCACGAGTTC CTCGAGCAGT ACATCATCGG CCAGGACGAT
GCGAAGCGCA CCCTCGCCGT CGCGGTGTAC AACCACTACA AGCGCATCAA GTCGGACGCG
AGCGGTACCA AGGATTCCAA GGACGAGCCG GTGGAGTTGG CGAAGTCCAA CATCCTGATG
CTCGGCCCCA CAGGGTGCGG TAAGACCTAC CTGGCTCAGA CGCTGGCGAA GCTGCTCAAC
GTCCCCTTCG CGATCGCCGA CGCCACCGCG TTGACCGAAG CCGGTTACGT CGGCGAGGAC
GTCGAGAACA TCCTGCTCAA GCTCATCCAG GCGGCCGACT ACGACGTCAA GCGCGCCGAG
ACGGGCATCA TCTACATCGA CGAGGTCGAC AAGATCGCCC GTAAGTCCGA GAACCCGTCG
ATCACCCGGG ACGTGTCGGG CGAAGGCGTG CAGCAGGCGC TGCTCAAGAT CCTGGAGGGC
ACGACGGCGT CGGTACCTCC GCAAGGGGGA CGGAAACACC CCCACCAGGA GTTCATCCAG
ATCGACACCA CGAACGTGTT GTTCATCGTG GCGGGTGCGT TCGCCGGCCT GGAGAAGATC
ATCAACGATC GGATCGGCAA ACGTGGTATC GGTTTCGGAG CCGAGATCCG CACCAAGCAG
GAGCTCGACG AGAGCGACAT CTTCAAAGAG GCGATGCCCG AGGATCTGAT CAAGTTCGGT
CTGATCCCGG AGTTCATCGG TCGGCTGCCC GTCGTCGCCA GCGTCAGCAA TCTCGACAAG
CAATCGCTCG TGCGCATCCT CACCGAACCG CGTAACGCGT TGACCAAGCA GTACAAGAAG
TTGTTCGAGA TGGACAACGT GGAGCTGGAG TTCACCAAGA CGGCGCTGGA GGCGATCGCC
GACCAGGCGC TGTTGCGGGG AACCGGCGCA CGCGGACTGC GCGCGATCAT GGAAGAGGTC
CTGCAACCGG TGATGTACGA GATCCCGAGT CGCGACGACG TGGCGAAGGT GGTCATCACC
GAACAGACCG TGCGGGAGAA CGTGAATCCC ACGATCGTGT CACGTCAGCC GACACGGCGG
CAGCGGGAGC GTGGGGAGAA ATCGGCCTGA
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| Protein sequence | MARIGDGGDL LKCSFCGKSQ KQVKKLIAGP GVYICDECIE LCNEIIEEEL AETNDVKLDE
LPKPADIHEF LEQYIIGQDD AKRTLAVAVY NHYKRIKSDA SGTKDSKDEP VELAKSNILM
LGPTGCGKTY LAQTLAKLLN VPFAIADATA LTEAGYVGED VENILLKLIQ AADYDVKRAE
TGIIYIDEVD KIARKSENPS ITRDVSGEGV QQALLKILEG TTASVPPQGG RKHPHQEFIQ
IDTTNVLFIV AGAFAGLEKI INDRIGKRGI GFGAEIRTKQ ELDESDIFKE AMPEDLIKFG
LIPEFIGRLP VVASVSNLDK QSLVRILTEP RNALTKQYKK LFEMDNVELE FTKTALEAIA
DQALLRGTGA RGLRAIMEEV LQPVMYEIPS RDDVAKVVIT EQTVRENVNP TIVSRQPTRR
QRERGEKSA
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