| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12170 |
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| Symbol | |
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| ID | 8386554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1254165 |
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| End bp | 1255604 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975303 |
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| Product | trigger factor |
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| Protein accession | YP_003133093 |
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| Protein GI | 257055261 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGAGCA CCGTCGAGCA GCTGAGCCCG ACGCGCGTGA AGATCAATGT CGAGGTGCCG
TTCGACGAGC TCAAACCGAA CTTCGACCGC GCTTACCGGA AGATCGCTCA GCAGGTTCGG
ATTCCAGGTT TTCGTCCCGG CAAGGCCCCG GCCCGTGTTC TCGAAAGCCG TATCGGCCGT
GCCCCGGTGC TCGACGAGGT CATCAACGAG GCCATCCCCG CGAAGTACCT TGAGGCCGTT
CGCAGCAGCG AGGTTCGTAC GCTGGGTCAG CCCGAGTTCG AGGTGACCAA GCTCGAGGAC
CGCGAGGTGC TCGAGTTCAC CGCCGAGGTC GATGTCCGTC CGGAGATCAC GCTTCCCGAC
CTCGACGACC TCACGGTCAG CGTGGACGAT GTGGAGCTCG ACGAGTCCGA GGTCGACGAA
CAGCTCGACC AACTGCGCGC TCGGTTCGGC GTCCTGAAGG GAGTCGACCG TCCGGCTGAG
AACGGCGACT TCGTCTCGAT CGACCTGTCA GCCACCGTCG ACGGCGAGGA GGTGCCCGAC
GCCTCCACCA CCGGTCTGTC CTACGAGATC GGCTCCGGCC AGCTCGTCGA AGGCATCGAC
GAGGCCATCA TCGGGGCGAA CGAGGGCGAG ACCAAGACCT TCACCACCAA GCTGGTCGCC
GGTGAGCACG CGGGTAAGGA CGCCGAGGTC ACCGTCAAGG TCAACTCGAT CAAGGAGCGC
GAGTTGCCCG AGGCGGACGA CGAGTTCGCC CAGCTCGCCA GTGAGTTCGA CACGTTGGAC
GAGCTCAAGG CCGACCTGCG CGAGCGTCTG CTGCGCATGA AGCGGGTCCA GCAGGGCGTG
CAGGCCAGGG ACAAGGTGCT CGAGGAGCTG TTGAACCGGG TCGAGGTCCC GGTTCCGGAG
AAGGTGCTCG AGGCCGAGAT CGCCAACCGC AAGCACGACG CCATCCATCC GTTCGACCAC
GACGAGGAGG CGTTCAAACG CTCACTGGAG GCGCAGGGCG GCAATCCCGA GGAGTGGGAG
AAGGAAGTCC GCGAGGAGGC CGAGAGGTCG GTGCGGACCC AGCTGCTGCT CGACGCCATC
GCCGATGCCC GTGACGTGTC GGTGAGTGAC TCCGAACTCA CCGAGCGCAT CATCTACCAG
GCTCAGCGTT TCGGGATGAA CCCGGACGAG TACGTCCAGC GGGCGCAGGA GGCGGGCCAG
CTCGGTGCCA TCTACGCCGA CGTGCGGCGG GGCAAGGCGC TCGCCGGGGT GGTGCGTGAG
GTCACCGTCA CCGACGCCTC CGGCCAGACG TTGGACCTGA GTGAACTGTT CGGCACCGGG
GACGACTCGA GCCAAGCTGC GGACTCGGCG TCGAACGAGG ACACTGCGTC AGATGAAGGG
TCGAGTGAGG ACGGTGCGTC CAAGGACGCC GACGAGTCGT CCTCGACAAC CGATCGGTGA
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| Protein sequence | MKSTVEQLSP TRVKINVEVP FDELKPNFDR AYRKIAQQVR IPGFRPGKAP ARVLESRIGR
APVLDEVINE AIPAKYLEAV RSSEVRTLGQ PEFEVTKLED REVLEFTAEV DVRPEITLPD
LDDLTVSVDD VELDESEVDE QLDQLRARFG VLKGVDRPAE NGDFVSIDLS ATVDGEEVPD
ASTTGLSYEI GSGQLVEGID EAIIGANEGE TKTFTTKLVA GEHAGKDAEV TVKVNSIKER
ELPEADDEFA QLASEFDTLD ELKADLRERL LRMKRVQQGV QARDKVLEEL LNRVEVPVPE
KVLEAEIANR KHDAIHPFDH DEEAFKRSLE AQGGNPEEWE KEVREEAERS VRTQLLLDAI
ADARDVSVSD SELTERIIYQ AQRFGMNPDE YVQRAQEAGQ LGAIYADVRR GKALAGVVRE
VTVTDASGQT LDLSELFGTG DDSSQAADSA SNEDTASDEG SSEDGASKDA DESSSTTDR
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