Gene Svir_12130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12130 
Symbol 
ID8386550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1250090 
End bp1250449 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content69% 
IMG OID644975299 
Producthypothetical protein 
Protein accessionYP_003133089 
Protein GI257055257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.949381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTGA CGAGTCCCCA GACACGGCTG GCCCACGCCC GCCGCCGTTA CCGGGGACCG 
TGGCGACCGA CCACGCTGGA CCCCGCTGAG GCACCGCTGG CGGTGACCCT CTACCGGAAA
CAGCGGCGTC ATGCCGTGGT GGCGTTGACG TCGGCGTTCG TCCTGGTGTT CGGACTGCCA
CTCCTGCTGA CGGTTCTGCC CGAGCTGGGC CGGGTCCGGG TGTTCGACGT CCCGTTGTCG
TGGCTGGCGG TCATGGTGGT GCCCTTCCCC GCCATGGTGC TGCTCGCGTT CACGCACCTT
CGTCGGGTCG AACGGGAGGA GAACACCGTC GAGGCCGCAC GTCCTGACGA GAGCGCATGA
 
Protein sequence
MTVTSPQTRL AHARRRYRGP WRPTTLDPAE APLAVTLYRK QRRHAVVALT SAFVLVFGLP 
LLLTVLPELG RVRVFDVPLS WLAVMVVPFP AMVLLAFTHL RRVEREENTV EAARPDESA