| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12070 |
|---|
| Symbol | |
|---|
| ID | 8386544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1242316 |
|---|
| End bp | 1243464 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644975294 |
|---|
| Product | protein-L-isoaspartate carboxylmethyltransferase |
|---|
| Protein accession | YP_003133084 |
|---|
| Protein GI | 257055252 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA CCCGTAGCGC GCTCGACTGG CGCGCACACG CGCAACGACT CGCTGGCCAA
CTCGTCGCCT CCGGCGACAT CCGCACCCCA CGATGGCGCG ATGCCATCGC CGCCGTCCCC
CGACACCTTT TGGTGCCCAC CGCCTACGAG CAGGACCACA GCGGCCGGTG GACGCCGTGG
AGCACCGTCG ACGACCTCGA TCGCGTCTAC TCCCCGGAAA CGCTCATCAC CGACATTGAC
CCCGCTGGCA TTGCGGTGTC CTCGTCGACG AAGCCGGACC TCATGGCGCG CATGCTCGAA
CTGCTCGACG CGCGCCCCGG GCATCGCGTG TTGGAAATCG GCACGGGCAC CGGCTATAAC
GTGGGGCTGC TCGCTCACGC TCTAGGCGAG GAGAACGTGT TCTCCGTCGA CATCGACCCC
GACCTTGTCG ACGCAGCTCG GGCACGGCTG GCGGTCGCCG GATATCACCC GACACTGGTT
GCTGACGACG GCGCGGGCGG GGTGCCGGAA CATGCGCCCT ACGACAGGAT CATCGCAACC
TGTTCCGCGC CGCGTGTGCC GTGGGCATGG GTGGAGCAGC TCGCCGACGA GGGCGTGATC
CTCGCCGACG TGAAAGTCGC CGCTAGCGCG GGCAACCTCG TTCGCCTCAC CCGCGTCGAC
GAGGACACCC TCGTTGGCCG CTTCACCACC CGATGGGCCG GGTTCATGGC CATGCGCCAC
CACCACGACA TCCCCACGGC CTTGACACCG ATCCCTACCA GGGGCGAGGG CGCCACGTAC
CGAACCACGG ACCTCGACAC TCCACGGGTG TGGGAGATTC CGCCCCTGTG GTTCCTGATC
AACCTGTGGC AAGGACCGGT CGGCTTCGGC TACACACTCG ACTCGGATAC CCGTCAACCC
ACCGGTGCCC TCTACACCGC TGCGGACGGA TCGTGGTGCC ACACCATTAC CGAATCCGGT
CGGCACACAG TCGCCGAGGG TGGGCCCCGC CGGTTGTGGT CGACCATCGA ACACGCCGCC
ACCCGGTGGC GGGAACTCGA CGAGCCTGAT TGGGACCGGC TTGGTTTGAC TGTCTCCCGG
GCAGAACAAA CGGTGTGGAT TGACCACCCC GACGGGCCCG CGTGGAATCT GCTGGCCGAG
CGTAGGTGA
|
|---|
| Protein sequence | MTTTRSALDW RAHAQRLAGQ LVASGDIRTP RWRDAIAAVP RHLLVPTAYE QDHSGRWTPW
STVDDLDRVY SPETLITDID PAGIAVSSST KPDLMARMLE LLDARPGHRV LEIGTGTGYN
VGLLAHALGE ENVFSVDIDP DLVDAARARL AVAGYHPTLV ADDGAGGVPE HAPYDRIIAT
CSAPRVPWAW VEQLADEGVI LADVKVAASA GNLVRLTRVD EDTLVGRFTT RWAGFMAMRH
HHDIPTALTP IPTRGEGATY RTTDLDTPRV WEIPPLWFLI NLWQGPVGFG YTLDSDTRQP
TGALYTAADG SWCHTITESG RHTVAEGGPR RLWSTIEHAA TRWRELDEPD WDRLGLTVSR
AEQTVWIDHP DGPAWNLLAE RR
|
|---|
| |